RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 CLP1Q92989 425 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 TIFAQ96CG3 184 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 FAXDC2Q96IV6 333 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 PNKPQ96T60 521 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 MMS19Q96T76 1030 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 TARS2Q9BW92 718 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 FUT8Q9BYC5 575 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 NKX2-4Q9H2Z4 354 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 FAM124BQ9H5Z6 455 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 FAM105AQ9NUU6 356 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 HSPBP1Q9NZL4 362 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 GCNT4Q9P109 453 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 RNF14Q9UBS8 474 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 FBXL5Q9UKA1 691 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 CPSF3Q9UKF6 684 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 GIT1Q9Y2X7 761 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 C2CD2Q9Y426 696 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 TTC28Q96AY4 2481 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 TDRD15B5MCY1 1934 aaKnown RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ZNF233A6NK53 670 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 MEIS3P2A8K0S8 358 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 BTNL10A8MVZ5 291 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 CLIC2O15247 247 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 P4HA2O15460 535 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 B4GALT5O43286 388 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 XPOTO43592 962 aaKnown RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 SRGAP2O75044 1071 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 GFPT2O94808 682 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 AMHP03971 560 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 CA3P07451 260 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 KRT13P13646 458 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 UCHL3P15374 230 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 KCNE1P15382 129 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 POU3F3P20264 500 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 RFX1P22670 979 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 PRKCIP41743 596 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 STAT1P42224 750 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 TNNT3P45378 269 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 GATMP50440 423 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 YARSP54577 528 aaKnown RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ERVK-21P61565 698 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 MYL7Q01449 175 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ARID5AQ03989 594 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 C2orf54Q08AI8 447 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 KCNA1Q09470 495 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 CETN1Q12798 172 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ADGRE1Q14246 886 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 PSMD6Q15008 389 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 NAB2Q15742 525 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 RAB30Q15771 203 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 SNRNP35Q16560 246 aaKnown RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 CLLU1OSQ5K130 101 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 BEND6Q5SZJ8 279 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 KLHDC7AQ5VTJ3 777 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 TWF2Q6IBS0 349 aaKnown RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ZNF572Q7Z3I7 529 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ECHDC2Q86YB7 292 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 MMGT1Q8N4V1 131 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 SMG8Q8ND04 991 aaKnown RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 TAF4BQ92750 862 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 SLC35C1Q96A29 364 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 BORCS6Q96GS4 357 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 MS4A3Q96HJ5 214 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 MFSD14AQ96MC6 490 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 CASD1Q96PB1 797 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 OSBPL9Q96SU4 736 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 MSTO1Q9BUK6 570 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 MRPL9Q9BYD2 267 aaKnown RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 TRIM6Q9C030 488 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ZNF576Q9H609 170 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 ABCB6Q9NP58 842 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 CNTN3Q9P232 1028 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 KANSL3Q9P2N6 904 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 USP20Q9Y2K6 914 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 INSL6Q9Y581 213 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 NCOR1O75376 2440 aa8.23□□□□□ -1.09
LRRC28-211ENST00000558890 VCANP13611 3396 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 FNDC1Q4ZHG4 1894 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 XIRP2A4UGR9 3374 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 GRID2IPA4D2P6 1211 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 ANKRD63C9JTQ0 380 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 MAP2K7O14733 419 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 POLR3GO15318 223 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 MEFVO15553 781 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 BUB1O43683 1085 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 TLL1O43897 1013 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 EXOC3O60645 756 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 SASH3O75995 380 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 SLC9A1P19634 815 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CYP3A5P20815 502 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 PON1P27169 355 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 PSEN1P49768 467 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CYP2J2P51589 502 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 AFF1P51825 1210 aaKnown RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 BFSP1Q12934 665 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CASP8Q14790 479 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 TERF2Q15554 542 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
LRRC28-211ENST00000558890 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
LRRC28-211ENST00000558890 CFAP221Q4G0U5 840 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms