RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ATAT1Q5SQI0 421 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 ANKRD40Q6AI12 368 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 OVOS1Q6IE37 1185 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 SLC8B1Q6J4K2 584 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 CES5AQ6NT32 575 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 GPR149Q86SP6 731 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 USP37Q86T82 979 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 WDR49Q8IV35 697 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 ADSSL1Q8N142 457 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 PARD3BQ8TEW8 1205 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 ZNF707Q96C28 371 aaPredicted RBP14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 PGLYRP2Q96PD5 576 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 RTP3Q9BQQ7 232 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 SFXN1Q9H9B4 322 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 ITGA11Q9UKX5 1188 aa14.91□□□□□ -0.02
TSPAN3-205ENST00000558745 C5orf42Q9H799 3197 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 HCRTO43612 131 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 GPR37L1O60883 481 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 ZMYND10O75800 440 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 ABLIM3O94929 683 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 VNN2O95498 520 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 C8AP07357 584 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 TYMPP19971 482 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 SSTR3P32745 418 aaPredicted RBP14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 ZP2Q05996 745 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 ITIH3Q06033 890 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 MORC3Q14149 939 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 C1orf220Q5T0J3 134 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 ZNF280DQ6N043 979 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 RNF19BQ6ZMZ0 732 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 OSTM1Q86WC4 334 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 GJD3Q8N144 294 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 OR10T2Q8NGX3 314 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 ZNF461Q8TAF7 563 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 SLC7A14Q8TBB6 771 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 PLEKHA4Q9H4M7 779 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 FAM50BQ9Y247 325 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 SNX9Q9Y5X1 595 aa14.9□□□□□ -0.02
TSPAN3-205ENST00000558745 MTCL1Q9Y4B5 1905 aaKnown RBP14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 DOCK6Q96HP0 2047 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 PPP1R3GB7ZBB8 358 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 CCL16O15467 120 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 C4BPAP04003 597 aaKnown RBP14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 ODC1P11926 461 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 MYL6P60660 151 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 NTHL1P78549 312 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 ADCY1Q08828 1119 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 SV2CQ496J9 727 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 CENPPQ6IPU0 288 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 KLHL10Q6JEL2 608 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 LRRTM3Q86VH5 581 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 ADHFE1Q8IWW8 467 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 HDAC7Q8WUI4 952 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 TMEM174Q8WUU8 243 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 SMG7Q92540 1137 aaKnown RBP14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 HPDLQ96IR7 371 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 ZNF560Q96MR9 790 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 PHF7Q9BWX1 381 aaPredicted RBP14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 CRISPLD1Q9H336 500 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 EPHX3Q9H6B9 360 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 CYP4F11Q9HBI6 524 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.89□□□□□ -0.036e-6■■■■■ 48.1
TSPAN3-205ENST00000558745 FRMD4BQ9Y2L6 1034 aa14.89□□□□□ -0.03
TSPAN3-205ENST00000558745 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 VNN1O95497 513 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 CYP11A1P05108 521 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 TRIM49P0CI25 452 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 TRIM49CP0CI26 452 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 CPB1P15086 417 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 STX17P56962 302 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 MYBPC2Q14324 1141 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 NFIL3Q16649 462 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 PPM1LQ5SGD2 360 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 TDRD10Q5VZ19 366 aaKnown RBP14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 PDCL2Q8N4E4 241 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 LRRC52Q8N7C0 313 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 RIPOR3Q96MK2 946 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 PRKD2Q9BZL6 878 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 MMRN2Q9H8L6 949 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 PIDD1Q9HB75 910 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 HCFC1R1Q9NWW0 138 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 KIAA1468Q9P260 1216 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 POLIQ9UNA4 740 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 SLC27A5Q9Y2P5 690 aa14.88□□□□□ -0.03
TSPAN3-205ENST00000558745 HUS1O60921 280 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 PHACTR2O75167 634 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 LRRN2O75325 713 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 C1RP00736 705 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 ATF2P15336 505 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 ACAT1P24752 427 aaKnown RBP14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 RPL13P26373 211 aaKnown RBP14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 PSMC2P35998 433 aaKnown RBP14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 PNPLA4P41247 253 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 MTHFRP42898 656 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 VAMP7P51809 220 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 PPP3CAQ08209 521 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 BIRC3Q13489 604 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms