RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 LTBRP36941 435 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 PIK3CAP42336 1068 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 CLCN4P51793 760 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 YWHAHQ04917 246 aaPredicted RBP15.42■□□□□ 0.06
USP3-205ENST00000557884 MRPL58Q14197 206 aaKnown RBP15.42■□□□□ 0.06
USP3-205ENST00000557884 TPD52L1Q16890 204 aaPredicted RBP15.42■□□□□ 0.06
USP3-205ENST00000557884 KLHL40Q2TBA0 621 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 ZACNQ401N2 412 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 WSCD1Q658N2 575 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 OVOS1Q6IE37 1185 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 FOXR2Q6PJQ5 311 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 PPFIBP1Q86W92 1011 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 SLC22A17Q8WUG5 538 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 SYAP1Q96A49 352 aaPredicted RBP15.42■□□□□ 0.06
USP3-205ENST00000557884 APOL5Q9BWW9 433 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 CLEC1BQ9P126 229 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 THEGQ9P2T0 379 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 BACE2Q9Y5Z0 518 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 PDCD11Q14690 1871 aaKnown RBP15.42■□□□□ 0.06
USP3-205ENST00000557884 ATG2AQ2TAZ0 1938 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.41■□□□□ 0.06
USP3-205ENST00000557884 TGM5O43548 720 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 HUS1O60921 280 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 ENPEPQ07075 957 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 KCNC3Q14003 757 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 STX1AQ16623 288 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 ZNF699Q32M78 642 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 METTL23Q86XA0 190 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 CREBRFQ8IUR6 639 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 PDCL2Q8N4E4 241 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 C12orf76Q8N812 135 aaPredicted RBP15.41■□□□□ 0.06
USP3-205ENST00000557884 TAS1R2Q8TE23 839 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 CASP10Q92851 521 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 XYLT2Q9H1B5 865 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 METTL14Q9HCE5 456 aaKnown RBP15.41■□□□□ 0.06
USP3-205ENST00000557884 MAN1C1Q9NR34 630 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 NXF1Q9UBU9 619 aaKnown RBP15.41■□□□□ 0.06
USP3-205ENST00000557884 FBXL5Q9UKA1 691 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 L1RE1Q9UN81 338 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 COG5Q9UP83 839 aa15.41■□□□□ 0.06
USP3-205ENST00000557884 ARHGEF37A1IGU5 675 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 TBC1D4O60343 1298 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 OAZ2O95190 189 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 FGFR1OPO95684 399 aaKnown RBP15.4■□□□□ 0.06
USP3-205ENST00000557884 CYP11A1P05108 521 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 OR4Q2P0C623 313 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 SRGAP2BP0DMP2 458 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 MXI1P50539 228 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 CDR1P51861 262 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 TNNC1P63316 161 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 ROR1Q01973 937 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 TYRO3Q06418 890 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 ANKRD54Q6NXT1 300 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 C15orf39Q6ZRI6 1047 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 C11orf57Q6ZUT1 292 aaPredicted RBP15.4■□□□□ 0.06
USP3-205ENST00000557884 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 TMEM209Q96SK2 561 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 MMS19Q96T76 1030 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 PI4K2AQ9BTU6 479 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 TMEM8AQ9HCN3 771 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 ANO10Q9NW15 660 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 DSEQ9UL01 958 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 POLIQ9UNA4 740 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 A0A0C4DFX4 3053 aa15.4■□□□□ 0.06
USP3-205ENST00000557884 HCRTO43612 131 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 STX10O60499 249 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 GNA14O95837 355 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 CPB1P15086 417 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 ERCC5P28715 1186 aaPredicted RBP15.39■□□□□ 0.05
USP3-205ENST00000557884 ATICP31939 592 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 GTF2H1P32780 548 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 RAB33AQ14088 237 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 WDR72Q3MJ13 1102 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 CBWD6Q4V339 395 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 HSP90AA4PQ58FG1 418 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 CBWD3Q5JTY5 395 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 CBWD5Q5RIA9 395 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 KRT39Q6A163 491 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 SPOPLQ6IQ16 392 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 SLC8B1Q6J4K2 584 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 TMEM184AQ6ZMB5 413 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 OSTM1Q86WC4 334 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 ADGRF2Q8IZF7 708 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 TOP6BLQ8N6T0 577 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 KREMEN2Q8NCW0 462 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 OR10T2Q8NGX3 314 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 SLC35C1Q96A29 364 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 CNOT6LQ96LI5 555 aaKnown RBP15.39■□□□□ 0.05
USP3-205ENST00000557884 RTP3Q9BQQ7 232 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 DNAJC25Q9H1X3 360 aa15.39■□□□□ 0.05
USP3-205ENST00000557884 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 OR6C75A6NL08 312 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 LRRN2O75325 713 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 CCDC192P0DO97 292 aa15.38■□□□□ 0.05
USP3-205ENST00000557884 MCCD1P59942 119 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms