RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CCDC73Q6ZRK6 1079 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 ADSSL1Q8N142 457 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 TRMT61BQ9BVS5 477 aaKnown RBP15.84■□□□□ 0.13
SHMT2-235ENST00000557740 SEMA4AQ9H3S1 761 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 HEBP1Q9NRV9 189 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 SPATA6Q9NWH7 488 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-235ENST00000557740 TBC1D7Q9P0N9 293 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 DSEQ9UL01 958 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 MRPS17Q9Y2R5 130 aaKnown RBP15.84■□□□□ 0.13
SHMT2-235ENST00000557740 R4GN57 208 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 USP34Q70CQ2 3546 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 ANO9A1A5B4 782 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 MTMR11A4FU01 709 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 MYMKA6NI61 221 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 TULP1O00294 542 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 PIRO00625 290 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 NRG2O14511 850 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 NCAM2O15394 837 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 LAMTOR5O43504 91 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 IL18RAPO95256 599 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 GCNT3O95395 438 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 SP9P0CG40 484 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 IDEP14735 1019 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 GJA1P17302 382 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 TAF6P49848 677 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 POU5F1Q01860 360 aaKnown RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 TEAD2Q15562 447 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 L1TD1Q5T7N2 865 aaKnown RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 ZNF852Q6ZMS4 543 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 METTL23Q86XA0 190 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 ATAD1Q8NBU5 361 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 SHKBP1Q8TBC3 707 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 ZSCAN18Q8TBC5 510 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 DEPDC1BQ8WUY9 529 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 ACCSQ96QU6 501 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 PYM1Q9BRP8 204 aaKnown RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 GPR88Q9GZN0 384 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 CRISPLD1Q9H336 500 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 ZSCAN16Q9H4T2 348 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 DPP3Q9NY33 737 aa15.83■□□□□ 0.12
SHMT2-235ENST00000557740 MTF2Q9Y483 593 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-235ENST00000557740 A0A1W2PRU2 124 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 MOSPD3O75425 235 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 PPP1R37O75864 691 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 LMNAP02545 664 aaKnown RBP15.82■□□□□ 0.12
SHMT2-235ENST00000557740 CYP11A1P05108 521 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 PSMC3P17980 439 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 TARSP26639 723 aaKnown RBP15.82■□□□□ 0.12
SHMT2-235ENST00000557740 VIPR2P41587 438 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 ALCAMQ13740 583 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 SLC39A14Q15043 492 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 SLC39A12Q504Y0 691 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 CENPPQ6IPU0 288 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 ITIH5Q86UX2 942 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 SYCP3Q8IZU3 236 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 TTC9BQ8N6N2 239 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 IRF7Q92985 503 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 DNAJC19Q96DA6 116 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 ZSWIM3Q96MP5 696 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 ZNF560Q96MR9 790 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 USP28Q96RU2 1077 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 TMEM209Q96SK2 561 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 NELL2Q99435 816 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 SEPT5Q99719 369 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-235ENST00000557740 DNAJC25Q9H1X3 360 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 IKZF4Q9H2S9 585 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 OLFML3Q9NRN5 406 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 MTMR6Q9Y217 621 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 SLC27A5Q9Y2P5 690 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 ASB3Q9Y575 518 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 MORC2Q9Y6X9 1032 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-235ENST00000557740 COL4A3Q01955 1670 aa15.82■□□□□ 0.12
SHMT2-235ENST00000557740 K7ELQ4 463 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-235ENST00000557740 CYB561D2O14569 222 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 STX6O43752 255 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 FGF19O95750 216 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 ADSSP30520 456 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 GDI1P31150 447 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 EP300Q09472 2414 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-235ENST00000557740 VEPH1Q14D04 833 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 STK38Q15208 465 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 SV2CQ496J9 727 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 VITQ6UXI7 678 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 NT5DC4Q86YG4 428 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 TMC8Q8IU68 726 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 YAF2Q8IY57 180 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 EFCAB13Q8IY85 973 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 THEM5Q8N1Q8 247 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 OR10T2Q8NGX3 314 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 FAM200AQ8TCP9 573 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 E2F7Q96AV8 911 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 FAM213AQ9BRX8 229 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 STRA6Q9BX79 667 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 TRPV4Q9HBA0 871 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 HSFX1Q9UBD0 423 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 PCDHB13Q9Y5F0 798 aa15.81■□□□□ 0.12
SHMT2-235ENST00000557740 MAN2B1O00754 1011 aa15.8■□□□□ 0.12
SHMT2-235ENST00000557740 ZNF263O14978 683 aa15.8■□□□□ 0.12
SHMT2-235ENST00000557740 SOAT2O75908 522 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms