RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 GCNT1Q02742 428 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ADCY2Q08462 1091 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 BYSLQ13895 437 aaKnown RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 EEF1DP3Q658K8 133 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 XRRA1Q6P2D8 792 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 MFSD7Q6UXD7 560 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 C4orf33Q8N1A6 199 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 SENP7Q9BQF6 1050 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 SCINQ9Y6U3 715 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 FAM107AO95990 144 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ZNF286BP0CG31 522 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ATP4AP20648 1035 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 TBXAS1P24557 533 aaPredicted RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 NFX1Q12986 1120 aaKnown RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 CCDC197Q8NCU1 140 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 NSRP1Q9H0G5 558 aaKnown RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 FAM49BQ9NUQ9 324 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ARHGAP28Q9P2N2 729 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 MAGED2Q9UNF1 606 aaPredicted RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 AGAP1Q9UPQ3 857 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 TOM1L1O75674 476 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 PSMD6Q15008 389 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 FAM102AQ5T9C2 384 aaPredicted RBP16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 CHMP6Q96FZ7 201 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 SEC16BQ96JE7 1060 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 FAM81BQ96LP2 452 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 GRIN2DO15399 1336 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 A0A087WZ62 844 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 TCP11X1B4DZS4 312 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 ADCY3O60266 1144 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 ZNF280AP59817 542 aaPredicted RBP16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 PPP1R21Q6ZMI0 780 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 PALM2Q8IXS6 379 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 CHST13Q8NET6 341 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 FDXACB1Q9BRP7 624 aaPredicted RBP16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 STRA6Q9BX79 667 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 CDK5RAP2Q96SN8 1893 aa16.23■□□□□ 0.19
TMEM55B-207ENST00000557041 TMEM120BA0PK00 339 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 BANF1O75531 89 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 PROSCO94903 275 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 CYP1A2P05177 515 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 POLR2BP30876 1174 aaKnown RBP16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 PEX5P50542 639 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 TFDP1Q14186 410 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 LRRC34Q8IZ02 419 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 MREGQ8N565 214 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 HVCN1Q96D96 273 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 SLC10A4Q96EP9 437 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 RIPK2O43353 540 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 TJP3O95049 919 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 MAMLD1Q13495 774 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 E2F5Q15329 346 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 HADHQ16836 314 aaKnown RBP16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 TBC1D31Q96DN5 1066 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 FGFR1OP2Q9NVK5 253 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 TJP2Q9UDY2 1190 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 USP2O75604 605 aaPredicted RBP16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 PDIA2Q13087 525 aaKnown RBP16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 KRT81Q14533 505 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 C1orf228Q6PIY5 440 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 TMEM192Q8IY95 271 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 PLCD3Q8N3E9 789 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 CGRRF1Q99675 332 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 NIF3L1Q9GZT8 377 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 IP6K2Q9UHH9 426 aa16.22■□□□□ 0.19
TMEM55B-207ENST00000557041 CEP350Q5VT06 3117 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 OGTO15294 1046 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 CST8O60676 142 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 ARIH2O95376 493 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 VNN1O95497 513 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 SNRPFP62306 86 aaKnown RBP16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 TBC1D1Q86TI0 1168 aaPredicted RBP16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 PACS2Q86VP3 889 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 FAM149B1Q96BN6 582 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 SOWAHBA6NEL2 793 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 SKOR1P84550 965 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 HIBCHQ6NVY1 386 aaPredicted RBP16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 METTL7BQ6UX53 244 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 RNF169Q8NCN4 708 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 ADPGKQ9BRR6 497 aa16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 RGS17Q9UGC6 210 aaPredicted RBP16.21■□□□□ 0.19
TMEM55B-207ENST00000557041 C4BPAP04003 597 aaKnown RBP16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 ACTN3Q08043 901 aaPredicted RBP16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 SGSM1Q2NKQ1 1148 aa16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 FAXCQ5TGI0 409 aa16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 HERPUD2Q9BSE4 406 aa16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 HAPLN2Q9GZV7 340 aa16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 GINM1Q9NU53 330 aa16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 DDX20Q9UHI6 824 aaKnown RBP16.21■□□□□ 0.18
TMEM55B-207ENST00000557041 MROH7Q68CQ1 1323 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms