RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GLRA2P23416 452 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 POU5F1BQ06416 359 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 SLC23A3Q6PIS1 610 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 FRMD1Q8N878 549 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 TBCKQ8TEA7 893 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 CCDC12Q8WUD4 166 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-220ENST00000557037 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 PPP1R10Q96QC0 940 aaKnown RBP13.77□□□□□ -0.21
PSEN1-220ENST00000557037 P2RY13Q9BPV8 354 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 FAM83CQ9BQN1 747 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 LXNQ9BS40 222 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 DNAJC25Q9H1X3 360 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 RGL1Q9NZL6 768 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 TEX15Q9BXT5 2789 aa13.77□□□□□ -0.21
PSEN1-220ENST00000557037 PTPRBP23467 1997 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 NUP210Q8TEM1 1887 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 A0A087WV48 116 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 P4HBP07237 508 aaKnown RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 CPB1P15086 417 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 ITPKAP23677 461 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 CHMLP26374 656 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 ARL2P36404 184 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 ABCG1P45844 678 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 EPHB3P54753 998 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 CYP4F8P98187 520 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 HNRNPDQ14103 355 aaKnown RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 MRPL58Q14197 206 aaKnown RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 CTTNQ14247 550 aaKnown RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 OTUD6AQ7L8S5 288 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 SLCO6A1Q86UG4 719 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 MINDY1Q8N5J2 469 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 BICD2Q8TD16 824 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 UROC1Q96N76 676 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 PGLYRP2Q96PD5 576 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 FNBP1Q96RU3 617 aa13.76□□□□□ -0.21
PSEN1-220ENST00000557037 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-220ENST00000557037 COL6A6A6NMZ7 2263 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 SYN3O14994 580 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 N4BP3O15049 544 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 SGSM2O43147 1006 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 VNN2O95498 520 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 LIG1P18858 919 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 GABRR2P28476 465 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
PSEN1-220ENST00000557037 FBXO43Q4G163 708 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 ARHGAP15Q53QZ3 475 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 LYSMD4Q5XG99 296 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 EEF1DP3Q658K8 133 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 SCUBE3Q8IX30 993 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 C4orf19Q8IY42 314 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 MDGA1Q8NFP4 955 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 CNOT6LQ96LI5 555 aaKnown RBP13.75□□□□□ -0.21
PSEN1-220ENST00000557037 NFKBIZQ9BYH8 718 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-220ENST00000557037 CRISPLD1Q9H336 500 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 CLMPQ9H6B4 373 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 DKK4Q9UBT3 224 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 PILRBQ9UKJ0 227 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 VAV3Q9UKW4 847 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 SLC6A14Q9UN76 642 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 STK24Q9Y6E0 443 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 ARID2Q68CP9 1835 aa13.75□□□□□ -0.21
PSEN1-220ENST00000557037 TNRC6BQ9UPQ9 1833 aaKnown RBP13.75□□□□□ -0.21
PSEN1-220ENST00000557037 CYP3A7-CYP3A51PA0A087WV96 503 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 ANTXRLA6NF34 631 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 TRABD2BA6NFA1 517 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 PODXLO00592 558 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 OR4Q2P0C623 313 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 CYP3A7P24462 503 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 ITPKBP27987 946 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 SEC13P55735 322 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 NUCB1Q02818 461 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 CYP4A11Q02928 519 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 DUSP4Q13115 394 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 PLD1Q13393 1074 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 ZNF280DQ6N043 979 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 DNAJB7Q7Z6W7 309 aaPredicted RBP13.74□□□□□ -0.21
PSEN1-220ENST00000557037 RASSF3Q86WH2 238 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 CCDC33Q8N5R6 958 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 DEFB119Q8N690 84 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 SPRYD3Q8NCJ5 442 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 DYDC2Q96IM9 177 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 PRMT7Q9NVM4 692 aaPredicted RBP13.74□□□□□ -0.21
PSEN1-220ENST00000557037 MAFFQ9ULX9 164 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 APOBEC2Q9Y235 224 aaKnown RBP13.74□□□□□ -0.21
PSEN1-220ENST00000557037 SLC27A5Q9Y2P5 690 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 MYO16Q9Y6X6 1858 aa13.74□□□□□ -0.21
PSEN1-220ENST00000557037 TEP1Q99973 2627 aaKnown RBP13.73□□□□□ -0.21
PSEN1-220ENST00000557037 KLF18A0A0U1RQI7 1052 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 SLC27A2O14975 620 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 SLC37A4O43826 429 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 SOAT2O75908 522 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms