RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 ZBTB8OSQ8IWT0 167 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 TRIM22Q8IYM9 498 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 SHKBP1Q8TBC3 707 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 PIGOQ8TEQ8 1089 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 SNX21Q969T3 373 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 COL26A1Q96A83 441 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 E2F7Q96AV8 911 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 UROC1Q96N76 676 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 EIF2AK1Q9BQI3 630 aaKnown RBP10.22□□□□□ -0.77
SYNE2-224ENST00000557024 ADPGKQ9BRR6 497 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 FZD8Q9H461 694 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 ANKEF1Q9NU02 776 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 GTSE1Q9NYZ3 720 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 KCNJ14Q9UNX9 436 aa10.22□□□□□ -0.77
SYNE2-224ENST00000557024 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.77
SYNE2-224ENST00000557024 ITPR1Q14643 2758 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 CCDC194A0A1B0GVG4 234 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 A0A1W2PRU2 124 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 K7ELQ4 463 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-224ENST00000557024 EDN1P05305 212 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 PDIA3P30101 505 aaKnown RBP10.21□□□□□ -0.77
SYNE2-224ENST00000557024 RARRES1P49788 294 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 EPHA5P54756 1037 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 SOX4Q06945 474 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-224ENST00000557024 FCHO2Q0JRZ9 810 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 STK3Q13188 491 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 FAM187BQ17R55 369 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 CTXN3Q4LDR2 81 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 STXBP5Q5T5C0 1151 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 TPGS2Q68CL5 300 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 CDCA2Q69YH5 1023 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-224ENST00000557024 GALNT17Q6IS24 598 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 FBXL16Q8N461 479 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 LEMD2Q8NC56 503 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 LRRC3BQ96PB8 259 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 SCNM1Q9BWG6 230 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 POLR3BQ9NW08 1133 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-224ENST00000557024 FBXL5Q9UKA1 691 aa10.21□□□□□ -0.77
SYNE2-224ENST00000557024 TICRRQ7Z2Z1 1910 aa10.21□□□□□ -0.78
SYNE2-224ENST00000557024 VWA8A3KMH1 1905 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 H7C4K7 107 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 PODXLO00592 558 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 CPLX1O14810 134 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 AKAP3O75969 853 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 LYPLA2O95372 231 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 DEXIO95424 95 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 CREB5Q02930 508 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 TNK2Q07912 1038 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 MAPK6Q16659 721 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 PLK5Q496M5 336 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 DAB2IPQ5VWQ8 1189 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 KIAA1211LQ6NV74 962 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 CPLX2Q6PUV4 134 aaKnown RBP10.2□□□□□ -0.78
SYNE2-224ENST00000557024 PIK3AP1Q6ZUJ8 805 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 ARID3BQ8IVW6 561 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-224ENST00000557024 SLFN12Q8IYM2 578 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 SYNPOQ8N3V7 929 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 BSNDQ8WZ55 320 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 ZNF274Q96GC6 653 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-224ENST00000557024 ZC3H10Q96K80 434 aaKnown RBP10.2□□□□□ -0.78
SYNE2-224ENST00000557024 HSD17B14Q9BPX1 270 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 GPR88Q9GZN0 384 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 SLC8A2Q9UPR5 921 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 DMXL2Q8TDJ6 3036 aa10.2□□□□□ -0.78
SYNE2-224ENST00000557024 CCDC163A0A0D9SF12 145 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 SMIM28A0A1B0GU29 152 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 LNP1A1A4G5 178 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 SYN3O14994 580 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 DCLK1O15075 740 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 BAG4O95429 457 aaKnown RBP10.19□□□□□ -0.78
SYNE2-224ENST00000557024 CAVIN2O95810 425 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 CPB1P15086 417 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 MRPL58Q14197 206 aaKnown RBP10.19□□□□□ -0.78
SYNE2-224ENST00000557024 ELF2Q15723 593 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 DCAF4L1Q3SXM0 396 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 ARHGAP29Q52LW3 1261 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 RNF19BQ6ZMZ0 732 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 HAUS6Q7Z4H7 955 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 CCDC83Q8IWF9 413 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 DEPTORQ8TB45 409 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 HHIPQ96QV1 700 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 KIFC3Q9BVG8 833 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 CCDC113Q9H0I3 377 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 DUSP15Q9H1R2 295 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-224ENST00000557024 C2orf40Q9H1Z8 148 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 KIAA1468Q9P260 1216 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 AFF4Q9UHB7 1163 aaKnown RBP10.19□□□□□ -0.78
SYNE2-224ENST00000557024 TPCN1Q9ULQ1 816 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 YIPF1Q9Y548 306 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 NUB1Q9Y5A7 615 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 SDK1Q7Z5N4 2213 aa10.19□□□□□ -0.78
SYNE2-224ENST00000557024 GCN1Q92616 2671 aaKnown RBP10.19□□□□□ -0.78
SYNE2-224ENST00000557024 BCLAF3A2AJT9 711 aaKnown RBP10.18□□□□□ -0.78
SYNE2-224ENST00000557024 ACKR2O00590 384 aa10.18□□□□□ -0.78
SYNE2-224ENST00000557024 HYAL3O43820 417 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-224ENST00000557024 CD2BP2O95400 341 aaKnown RBP10.18□□□□□ -0.78
SYNE2-224ENST00000557024 CEACAM1P13688 526 aa10.18□□□□□ -0.78
SYNE2-224ENST00000557024 ATP2B1P20020 1258 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms