RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 MAN1B1Q9UKM7 699 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 MAFFQ9ULX9 164 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 TIMM13Q9Y5L4 95 aaPredicted RBP11.52□□□□□ -0.57
LINC00239-201ENST00000556973 PTPRJQ12913 1337 aa11.52□□□□□ -0.57
LINC00239-201ENST00000556973 C2orf16Q68DN1 1984 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 WDR27A2RRH5 827 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 OR6C75A6NL08 312 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 IKBKBO14920 756 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 CST3P01034 146 aaPredicted RBP11.51□□□□□ -0.57
LINC00239-201ENST00000556973 HNRNPA1P09651 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ATF2P15336 505 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ELF1P32519 619 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 CASP4P49662 377 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ROR1Q01973 937 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ENPEPQ07075 957 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ZCWPW2Q504Y3 356 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 TPGS2Q68CL5 300 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 LMBRD2Q68DH5 695 aaPredicted RBP11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ISM2Q6H9L7 571 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 CCDC149Q6ZUS6 474 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 DPH6Q7L8W6 267 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ADSSL1Q8N142 457 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 THEM5Q8N1Q8 247 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 DHTKD1Q96HY7 919 aaPredicted RBP11.51□□□□□ -0.57
LINC00239-201ENST00000556973 HPDLQ96IR7 371 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 TSG101Q99816 390 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 PRKD2Q9BZL6 878 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 GDAP2Q9NXN4 497 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 KIAA1468Q9P260 1216 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 SIX4Q9UIU6 781 aa11.51□□□□□ -0.57
LINC00239-201ENST00000556973 LRRIQ3A6PVS8 624 aaPredicted RBP11.5□□□□□ -0.57
LINC00239-201ENST00000556973 CETN3O15182 167 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 HUS1O60921 280 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 RFPL2O75678 378 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 AKAP3O75969 853 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 HOXA9P31269 272 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 ATICP31939 592 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 PSMC2P35998 433 aaKnown RBP11.5□□□□□ -0.57
LINC00239-201ENST00000556973 ARPP19P56211 112 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 FKBP3Q00688 224 aaKnown RBP11.5□□□□□ -0.57
LINC00239-201ENST00000556973 ZP2Q05996 745 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 LRRC63Q05C16 580 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 MORC3Q14149 939 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 PPM1LQ5SGD2 360 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 LIN9Q5TKA1 542 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 SCARA3Q6AZY7 606 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 INTS8Q75QN2 995 aaKnown RBP11.5□□□□□ -0.57
LINC00239-201ENST00000556973 GJD3Q8N144 294 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 TMEM86AQ8N2M4 240 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 TRIML1Q8N9V2 468 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 PLEKHO2Q8TD55 490 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 NECAB3Q96P71 396 aaPredicted RBP11.5□□□□□ -0.57
LINC00239-201ENST00000556973 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
LINC00239-201ENST00000556973 PIDD1Q9HB75 910 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 LMBRD1Q9NUN5 540 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 AFF4Q9UHB7 1163 aaKnown RBP11.5□□□□□ -0.57
LINC00239-201ENST00000556973 TSC2P49815 1807 aa11.5□□□□□ -0.57
LINC00239-201ENST00000556973 LOC730098B7Z3J9 87 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 GOLGA6L22H0YM25 854 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 TNFRSF10AO00220 468 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 PSMA7O14818 248 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 PHACTR2O75167 634 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 C4BPAP04003 597 aaKnown RBP11.49□□□□□ -0.57
LINC00239-201ENST00000556973 C8AP07357 584 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 WEE2P0C1S8 567 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 FAM163BP0C2L3 166 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 KRT13P13646 458 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 CPB1P15086 417 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 VAMP7P51809 220 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 MCCD1P59942 119 aaPredicted RBP11.49□□□□□ -0.57
LINC00239-201ENST00000556973 DLG4P78352 724 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 BFSP1Q12934 665 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 GPR17Q13304 367 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 TRPC3Q13507 836 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 CAMK4Q16566 473 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 RNF19BQ6ZMZ0 732 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 FAM186BQ8IYM0 893 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 TCEAL8Q8IYN2 117 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 SPATA18Q8TC71 538 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 SMG7Q92540 1137 aaKnown RBP11.49□□□□□ -0.57
LINC00239-201ENST00000556973 ZNF707Q96C28 371 aaPredicted RBP11.49□□□□□ -0.57
LINC00239-201ENST00000556973 FAM84AQ96KN4 292 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 MKNK1Q9BUB5 465 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 POMKQ9H5K3 350 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 CYP4F11Q9HBI6 524 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 WDR6Q9NNW5 1121 aaKnown RBP11.49□□□□□ -0.57
LINC00239-201ENST00000556973 NR2E1Q9Y466 385 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 SNX9Q9Y5X1 595 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 DENND4AQ7Z401 1863 aa11.49□□□□□ -0.57
LINC00239-201ENST00000556973 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
LINC00239-201ENST00000556973 BIN1O00499 593 aa11.48□□□□□ -0.57
LINC00239-201ENST00000556973 PRRG1O14668 218 aa11.48□□□□□ -0.57
LINC00239-201ENST00000556973 XYLBO75191 536 aa11.48□□□□□ -0.57
LINC00239-201ENST00000556973 STAU1O95793 577 aaKnown RBP11.48□□□□□ -0.57
LINC00239-201ENST00000556973 POU2F2P09086 479 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms