RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 LAMA4Q16363 1823 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ERICH2A1L162 156 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 PYCARD-AS1I3L0S3 204 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 DHX15O43143 795 aaKnown RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ALDH1A2O94788 518 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 MYL4P12829 197 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 AXLP30530 894 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 HOXA11P31270 313 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 GRIK3Q13003 919 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 SART3Q15020 963 aaKnown RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 PCBP1Q15365 356 aaKnown RBP eCLIP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 UBE2SQ16763 222 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 LINC01559Q495D7 138 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 PREPLQ4J6C6 727 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 C4orf17Q53FE4 359 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 UBXN11Q5T124 520 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ANKS3Q6ZW76 656 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 SLCO6A1Q86UG4 719 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 PLA2G4DQ86XP0 818 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ARID3BQ8IVW6 561 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 NAXDQ8IW45 347 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 TCEAL8Q8IYN2 117 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 SMG8Q8ND04 991 aaKnown RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 EVI5LQ96CN4 794 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 CCDC51Q96ER9 411 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 SPACA7Q96KW9 195 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 NLRP4Q96MN2 994 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 CAMK1GQ96NX5 476 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 CDC6Q99741 560 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 LZTS2Q9BRK4 669 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 SPZ1Q9BXG8 430 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 TRIM6Q9C030 488 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ASAH2Q9NR71 780 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ZBTB40Q9NUA8 1239 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 TMEM74BQ9NUR3 256 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ANKMY1Q9P2S6 941 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 MTRRQ9UBK8 725 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 SRPK3Q9UPE1 567 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 IPPQ9Y573 584 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 HEMK1Q9Y5R4 338 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-245ENST00000556958 CDY1Q9Y6F8 540 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 ZMYM2Q9UBW7 1377 aa6.39□□□□□ -1.39
ATXN3-245ENST00000556958 CELSR3Q9NYQ7 3312 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 DOCK8Q8NF50 2099 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 CREBBPQ92793 2442 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 POM121CA8CG34 1229 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 WDR64B1ANS9 1081 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 TRAPPC3O43617 180 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 ATF2P15336 505 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 VARSP26640 1264 aaKnown RBP6.38□□□□□ -1.39
ATXN3-245ENST00000556958 CCR2P41597 374 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 GNAQP50148 359 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 PRKCEQ02156 737 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 TUSC3Q13454 348 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 SEC23AQ15436 765 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 IMMTQ16891 758 aaKnown RBP6.38□□□□□ -1.39
ATXN3-245ENST00000556958 C2orf27AQ580R0 203 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 FSTL4Q6MZW2 842 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 NOTUMQ6P988 496 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 ZNF574Q6ZN55 896 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-245ENST00000556958 CATIPQ7Z7H3 387 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 EXOC8Q8IYI6 725 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 RPLP0P6Q8NHW5 317 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 RABGGTAQ92696 567 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 ITPKCQ96DU7 683 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 CNOT6LQ96LI5 555 aaKnown RBP6.38□□□□□ -1.39
ATXN3-245ENST00000556958 ZNF577Q9BSK1 485 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
ATXN3-245ENST00000556958 TPSD1Q9BZJ3 242 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 CYP4F11Q9HBI6 524 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 SNTG2Q9NY99 539 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 PILRBQ9UKJ0 227 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 MAFFQ9ULX9 164 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 DDX19BQ9UMR2 479 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 LOXHD1Q8IVV2 1947 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 PTPRQQ9UMZ3 2332 aa6.38□□□□□ -1.39
ATXN3-245ENST00000556958 UBR5O95071 2799 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-245ENST00000556958 IGKV6-21A0A0C4DH24 114 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 K7ELQ4 463 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-245ENST00000556958 IFIT3O14879 490 aaKnown RBP6.37□□□□□ -1.39
ATXN3-245ENST00000556958 AP5Z1O43299 807 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 MOSPD3O75425 235 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 ERLIN2O94905 339 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 ABLIM3O94929 683 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 FGF19O95750 216 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 EGFP01133 1207 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 BMP2P12643 396 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 BCKDHBP21953 392 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 FGFR3P22607 806 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 ADSSP30520 456 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 P2RY2P41231 377 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 PTGER3P43115 390 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 GALK1P51570 392 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 EPHA5P54756 1037 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 PTK2Q05397 1052 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 TRDNQ13061 729 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 DRP2Q13474 957 aa6.37□□□□□ -1.39
ATXN3-245ENST00000556958 AGERQ15109 404 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms