RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 WSCD1Q658N2 575 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 CSGALNACT2Q8N6G5 542 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 TTC9BQ8N6N2 239 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 XXYLT1Q8NBI6 393 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 ENGASEQ8NFI3 743 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 ZNF461Q8TAF7 563 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 CCDC127Q96BQ5 260 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 BORCS6Q96GS4 357 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 ANKRD36BP1Q96IX9 119 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 MYADMQ96S97 322 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 CGRRF1Q99675 332 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 RTP3Q9BQQ7 232 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 GZF1Q9H116 711 aaPredicted RBP11.19□□□□□ -0.62
SNX6-208ENST00000556712 CRISPLD1Q9H336 500 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 INTS13Q9NVM9 706 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 ITGA11Q9UKX5 1188 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
SNX6-208ENST00000556712 INSL5Q9Y5Q6 135 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 MYO10Q9HD67 2058 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 MTMR11A4FU01 709 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 KPNA7A9QM74 516 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 NRG2O14511 850 aaPredicted RBP11.18□□□□□ -0.62
SNX6-208ENST00000556712 HCRTO43612 131 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 EXOC3O60645 756 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 XYLBO75191 536 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 TNNC2P02585 160 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 NR3C1P04150 777 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 CYP11A1P05108 521 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 HNRNPA1P09651 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX6-208ENST00000556712 ALADP13716 330 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 ATF2P15336 505 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 ELF1P32519 619 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
SNX6-208ENST00000556712 FAM160A1Q05DH4 1040 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 PSMD6Q15008 389 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 CYP26C1Q6V0L0 522 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 OTOP3Q7RTS5 596 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 WDR49Q8IV35 697 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 C12orf56Q8IXR9 622 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 PLEKHO2Q8TD55 490 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 CACTINQ8WUQ7 758 aaKnown RBP11.18□□□□□ -0.62
SNX6-208ENST00000556712 ING5Q8WYH8 240 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 CCDC47Q96A33 483 aaKnown RBP11.18□□□□□ -0.62
SNX6-208ENST00000556712 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 RHOBTB2Q9BYZ6 727 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 KIAA1586Q9HCI6 787 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
SNX6-208ENST00000556712 LIMD1Q9UGP4 676 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 AFF4Q9UHB7 1163 aaKnown RBP11.18□□□□□ -0.62
SNX6-208ENST00000556712 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 L1RE1Q9UN81 338 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 USTQ9Y2C2 406 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 YIPF1Q9Y548 306 aa11.18□□□□□ -0.62
SNX6-208ENST00000556712 TECTAO75443 2155 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 ARHGEF37A1IGU5 675 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 SOAT2O75908 522 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 LRG1P02750 347 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 TNNI1P19237 187 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 FSHRP23945 695 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 SNRPFP62306 86 aaKnown RBP11.17□□□□□ -0.62
SNX6-208ENST00000556712 ZXDAP98168 799 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 TWF1Q12792 350 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 KCNB1Q14721 858 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 SURF1Q15526 300 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 CCDC142Q17RM4 750 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 SLC5A9Q2M3M2 681 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 UVSSAQ2YD98 709 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 PABPC1LQ4VXU2 614 aaKnown RBP11.17□□□□□ -0.62
SNX6-208ENST00000556712 SLC39A12Q504Y0 691 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 TMEM31Q5JXX7 168 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 TPGS2Q68CL5 300 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 OSTM1Q86WC4 334 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 TCEAL8Q8IYN2 117 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 ZDHHC14Q8IZN3 488 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 LRRC52Q8N7C0 313 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 ITFG1Q8TB96 612 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 GOLGA5Q8TBA6 731 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 RSAD2Q8WXG1 361 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 ELMO3Q96BJ8 720 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 ACSF2Q96CM8 615 aaPredicted RBP11.17□□□□□ -0.62
SNX6-208ENST00000556712 FNBP1Q96RU3 617 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 LRFN3Q9BTN0 628 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 CGNQ9P2M7 1197 aaKnown RBP11.17□□□□□ -0.62
SNX6-208ENST00000556712 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
SNX6-208ENST00000556712 LRRIQ3A6PVS8 624 aaPredicted RBP11.16□□□□□ -0.62
SNX6-208ENST00000556712 PDXKO00764 312 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 POU2F2P09086 479 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
SNX6-208ENST00000556712 PNPLA4P41247 253 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 DLG4P78352 724 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 RBP5P82980 135 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 DUSP4Q13115 394 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 GPR17Q13304 367 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 MYBPC2Q14324 1141 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 DUOXA2Q1HG44 320 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 CEP135Q66GS9 1140 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 TRAPPC11Q7Z392 1133 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 METTL23Q86XA0 190 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms