RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 SEMA4GQ9NTN9 838 aa3.93□□□□□ -1.78
RDH11-208ENST00000556692 USP36Q9P275 1121 aaKnown RBP3.93□□□□□ -1.78
RDH11-208ENST00000556692 USP35Q9P2H5 1018 aa3.93□□□□□ -1.78
RDH11-208ENST00000556692 DDX19BQ9UMR2 479 aa3.93□□□□□ -1.78
RDH11-208ENST00000556692 DCCP43146 1447 aa3.93□□□□□ -1.78
RDH11-208ENST00000556692 A0A1W2PR48 441 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 CGB1A6NKQ9 187 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 LEFTY2O00292 366 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 EIF5BO60841 1220 aaKnown RBP3.92□□□□□ -1.78
RDH11-208ENST00000556692 SEC24DO94855 1032 aaPredicted RBP3.92□□□□□ -1.78
RDH11-208ENST00000556692 CLEC2LP0C7M8 214 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 ZNF853P0CG23 659 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 LSP1P33241 339 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 SCNN1BP51168 640 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 GNAI1P63096 354 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 BLOC1S1P78537 153 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 HDAC1Q13547 482 aaPredicted RBP3.92□□□□□ -1.78
RDH11-208ENST00000556692 FHL1Q13642 323 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 SART3Q15020 963 aaKnown RBP3.92□□□□□ -1.78
RDH11-208ENST00000556692 SEPT7Q16181 437 aaKnown RBP3.92□□□□□ -1.78
RDH11-208ENST00000556692 METTL24Q5JXM2 366 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 C20orf194Q5TEA3 1177 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 LMBR1LQ6UX01 489 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 C16orf86Q6ZW13 317 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 HOMER1Q86YM7 354 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 ZNF610Q8N9Z0 462 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 SMC1BQ8NDV3 1235 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 NINJ1Q92982 152 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 COG3Q96JB2 828 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 PRDM12Q9H4Q4 367 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.92□□□□□ -1.78
RDH11-208ENST00000556692 STK26Q9P289 416 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 POLKQ9UBT6 870 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 TMPRSS11EQ9UL52 423 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 EID1Q9Y6B2 187 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 SHANK3Q9BYB0 1731 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 ABCC4O15439 1325 aa3.92□□□□□ -1.78
RDH11-208ENST00000556692 CHD4Q14839 1912 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 IBTKQ9P2D0 1353 aaPredicted RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 UNC119BA6NIH7 251 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 IPO8O15397 1037 aaKnown RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 PLIN1O60240 522 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 NRP2O60462 931 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 BCAR3O75815 825 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 HSP90B1P14625 803 aaKnown RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 CANXP27824 592 aaKnown RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 GPR15P49685 360 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 WNT3AP56704 352 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 RNASE9P60153 205 aaKnown RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 APBA1Q02410 837 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 NHLH2Q02577 135 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 PPARAQ07869 468 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 TERF2Q15554 542 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 GPR158Q5T848 1215 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 ABHD17BQ5VST6 288 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 TNS2Q63HR2 1409 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 ANKS6Q68DC2 871 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 ATF7IPQ6VMQ6 1270 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 DOK3Q7L591 496 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 GPRIN1Q7Z2K8 1008 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 PKD1L3Q7Z443 1732 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 GDF7Q7Z4P5 450 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 LYSMD2Q8IV50 215 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 NIM1KQ8IY84 436 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 SLC44A3Q8N4M1 653 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 PDPRQ8NCN5 879 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 TARS2Q9BW92 718 aaKnown RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 TEX101Q9BY14 249 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 ALG13Q9NP73 1137 aaKnown RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 FANCLQ9NW38 375 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 BABAM1Q9NWV8 329 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 EVLQ9UI08 416 aaPredicted RBP3.91□□□□□ -1.78
RDH11-208ENST00000556692 PRSS50Q9UI38 385 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 PPP2R3BQ9Y5P8 575 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 NUMBLQ9Y6R0 609 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 IGSF1Q8N6C5 1336 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 SALL3Q9BXA9 1300 aa3.91□□□□□ -1.78
RDH11-208ENST00000556692 GLI3P10071 1580 aa3.9□□□□□ -1.78
RDH11-208ENST00000556692 LAMB4A4D0S4 1761 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 GAGE12BA1L429 117 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 GAGE12HA6NDE8 117 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 PRR5-ARHGAP8B1AHC4 643 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 HTATSF1O43719 755 aaKnown RBP3.9□□□□□ -1.79
RDH11-208ENST00000556692 TRIM27P14373 513 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 BMPR1AP36894 532 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 MPLP40238 635 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 NRG3P56975 720 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 RIPK4P57078 832 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 IL2P60568 153 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 PHC1P78364 1004 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 TRIM25Q14258 630 aaKnown RBP3.9□□□□□ -1.79
RDH11-208ENST00000556692 ABHD15Q6UXT9 468 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 FRMD7Q6ZUT3 714 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 KRT27Q7Z3Y8 459 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 SYT12Q8IV01 421 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 SMC5Q8IY18 1101 aa3.9□□□□□ -1.79
RDH11-208ENST00000556692 FTSJ3Q8IY81 847 aaKnown RBP3.9□□□□□ -1.79
RDH11-208ENST00000556692 CPEB3Q8NE35 698 aaKnown RBP3.9□□□□□ -1.79
RDH11-208ENST00000556692 APPBP2Q92624 585 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms