RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 EPHX3Q9H6B9 360 aa12.44□□□□□ -0.42
SLIRP-206ENST00000556375 AFF4Q9UHB7 1163 aaKnown RBP12.44□□□□□ -0.42
SLIRP-206ENST00000556375 MAFFQ9ULX9 164 aa12.44□□□□□ -0.42
SLIRP-206ENST00000556375 MYO10Q9HD67 2058 aa12.44□□□□□ -0.42
SLIRP-206ENST00000556375 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-206ENST00000556375 PDXKO00764 312 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 CYB561D2O14569 222 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 EXOC3O60645 756 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 PRPF40AO75400 957 aaKnown RBP12.43□□□□□ -0.42
SLIRP-206ENST00000556375 TNNC2P02585 160 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 ELF1P32519 619 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 MYBPC2Q14324 1141 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 DUOXA2Q1HG44 320 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 LMBRD2Q68DH5 695 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-206ENST00000556375 SLC9A9Q8IVB4 645 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 RDH13Q8NBN7 331 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 OR5B17Q8NGF7 314 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 BORCS6Q96GS4 357 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 FAM84AQ96KN4 292 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 AGAP1Q9UPQ3 857 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 TECTAO75443 2155 aa12.43□□□□□ -0.42
SLIRP-206ENST00000556375 PRRG1O14668 218 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 CCL16O15467 120 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 LRG1P02750 347 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 NR3C1P04150 777 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 KRT19P08727 400 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
SLIRP-206ENST00000556375 RBP5P82980 135 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 BFSP1Q12934 665 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 PNOCQ13519 176 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 PTPN21Q16825 1174 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-206ENST00000556375 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 GUF1Q8N442 669 aaKnown RBP12.42□□□□□ -0.42
SLIRP-206ENST00000556375 CSGALNACT2Q8N6G5 542 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 CYP4F11Q9HBI6 524 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 DMAC2Q9NW81 257 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 RMND1Q9NWS8 449 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 GDAP2Q9NXN4 497 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
SLIRP-206ENST00000556375 TRAF3IP3Q9Y228 551 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
SLIRP-206ENST00000556375 INSL5Q9Y5Q6 135 aa12.42□□□□□ -0.42
SLIRP-206ENST00000556375 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-206ENST00000556375 GPR37L1O60883 481 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 N4BP1O75113 896 aaKnown RBP12.41□□□□□ -0.42
SLIRP-206ENST00000556375 SEC24AO95486 1093 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 TNNI1P19237 187 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-206ENST00000556375 ADCY1Q08828 1119 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 MYO1EQ12965 1108 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 GPR17Q13304 367 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 NFIL3Q16649 462 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 GET4Q7L5D6 327 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-206ENST00000556375 TRAPPC11Q7Z392 1133 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 OR10T2Q8NGX3 314 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 SPATA18Q8TC71 538 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 CCDC127Q96BQ5 260 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 GSDMAQ96QA5 445 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 GZF1Q9H116 711 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-206ENST00000556375 C11orf16Q9NQ32 467 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.42
SLIRP-206ENST00000556375 EPS15L1Q9UBC2 864 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 L1RE1Q9UN81 338 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 POLIQ9UNA4 740 aa12.41□□□□□ -0.42
SLIRP-206ENST00000556375 MTMR11A4FU01 709 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
SLIRP-206ENST00000556375 HUS1O60921 280 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 SMC2O95347 1197 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 VNN2O95498 520 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 FSHRP23945 695 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 NTHL1P78549 312 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 ZXDAP98168 799 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 MTMR3Q13615 1198 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 PABPC1LQ4VXU2 614 aaKnown RBP12.4□□□□□ -0.42
SLIRP-206ENST00000556375 ZCWPW2Q504Y3 356 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 TMEM31Q5JXX7 168 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-206ENST00000556375 THEM5Q8N1Q8 247 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 PDCL2Q8N4E4 241 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 SPATA20Q8TB22 786 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 PLEKHO2Q8TD55 490 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 EDAQ92838 391 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 HPDLQ96IR7 371 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 PGLYRP2Q96PD5 576 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 MYADMQ96S97 322 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 TMEM209Q96SK2 561 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 ZCWPW1Q9H0M4 648 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms