RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZNF707Q96C28 371 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 ZNF560Q96MR9 790 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 FBXL5Q9UKA1 691 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 USTQ9Y2C2 406 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 CLUHO75153 1309 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 DOCK6Q96HP0 2047 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 WDR27A2RRH5 827 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 PI4K2BG5E9Z4 385 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 SPTLC1O15269 473 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 MAP3K7O43318 606 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 DCXO43602 365 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 OAZ2O95190 189 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 POU2F2P09086 479 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 ALADP13716 330 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 TAF6P49848 677 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 SURF1Q15526 300 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 SV2CQ496J9 727 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 PPM1LQ5SGD2 360 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 USP37Q86T82 979 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 CBWD2Q8IUF1 395 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 FMR1NBQ8N0W7 255 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-205ENST00000556310 TDRD5Q8NAT2 981 aaKnown RBP12.46□□□□□ -0.41
SLIRP-205ENST00000556310 XXYLT1Q8NBI6 393 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 SLC7A14Q8TBB6 771 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
SLIRP-205ENST00000556310 SENP8Q96LD8 212 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 OXCT2Q9BYC2 517 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-205ENST00000556310 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 PDE11AQ9HCR9 933 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 WDR6Q9NNW5 1121 aaKnown RBP12.46□□□□□ -0.41
SLIRP-205ENST00000556310 ITGA11Q9UKX5 1188 aa12.46□□□□□ -0.41
SLIRP-205ENST00000556310 C2CD4DB7Z1M9 353 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 CLIC2O15247 247 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 ABLIM3O94929 683 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 ITGB3P05106 788 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 CYP11A1P05108 521 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 TMEM191BP0C7N4 346 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 SP100P23497 879 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-205ENST00000556310 ANP32AP39687 249 aaKnown RBP12.45□□□□□ -0.42
SLIRP-205ENST00000556310 PNPLA4P41247 253 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 CYP2J2P51589 502 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 FAM160A1Q05DH4 1040 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 KCNB1Q14721 858 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 SNRNP35Q16560 246 aaKnown RBP12.45□□□□□ -0.42
SLIRP-205ENST00000556310 UVSSAQ2YD98 709 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 TPGS2Q68CL5 300 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 OVOS1Q6IE37 1185 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 LRRC52Q8N7C0 313 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 ZNF461Q8TAF7 563 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 C1QTNF1Q9BXJ1 281 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 MTMR12Q9C0I1 747 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 PIDD1Q9HB75 910 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 INTS13Q9NVM9 706 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 MUTYHQ9UIF7 546 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 DSEQ9UL01 958 aa12.45□□□□□ -0.42
SLIRP-205ENST00000556310 TIMM13Q9Y5L4 95 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-205ENST00000556310 PTPRJQ12913 1337 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 NOTCH4Q99466 2003 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 OR6C75A6NL08 312 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 XYLBO75191 536 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 KIF20AO95235 890 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 CPB1P15086 417 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 ATF2P15336 505 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 POLR2BP30876 1174 aaKnown RBP12.44□□□□□ -0.42
SLIRP-205ENST00000556310 ARPP19P56211 112 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 SNW1Q13573 536 aaKnown RBP12.44□□□□□ -0.42
SLIRP-205ENST00000556310 PSMD6Q15008 389 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 OTOP3Q7RTS5 596 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 WDR49Q8IV35 697 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 TCEAL8Q8IYN2 117 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 ZDHHC14Q8IZN3 488 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 ENGASEQ8NFI3 743 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 CXorf38Q8TB03 319 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 TMEM174Q8WUU8 243 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 ACSF2Q96CM8 615 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-205ENST00000556310 ANKRD36BP1Q96IX9 119 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 KCTD10Q9H3F6 313 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 EPHX3Q9H6B9 360 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 AFF4Q9UHB7 1163 aaKnown RBP12.44□□□□□ -0.42
SLIRP-205ENST00000556310 MAFFQ9ULX9 164 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 MYO10Q9HD67 2058 aa12.44□□□□□ -0.42
SLIRP-205ENST00000556310 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 PDXKO00764 312 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 CYB561D2O14569 222 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 EXOC3O60645 756 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 PRPF40AO75400 957 aaKnown RBP12.43□□□□□ -0.42
SLIRP-205ENST00000556310 TNNC2P02585 160 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 ELF1P32519 619 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 MYBPC2Q14324 1141 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 DUOXA2Q1HG44 320 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 LMBRD2Q68DH5 695 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-205ENST00000556310 SLC9A9Q8IVB4 645 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 RDH13Q8NBN7 331 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 OR5B17Q8NGF7 314 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 BORCS6Q96GS4 357 aa12.43□□□□□ -0.42
SLIRP-205ENST00000556310 FAM84AQ96KN4 292 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms