RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 LRRC2Q9BYS8 371 aa10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 GLT8D2Q9H1C3 349 aa10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 NGRNQ9NPE2 291 aaKnown RBP10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 RBM28Q9NW13 759 aaKnown RBP10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 TMEM161AQ9NX61 479 aa10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 TMEM260Q9NX78 707 aa10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 BARHL2Q9NY43 387 aa10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 REV1Q9UBZ9 1251 aa10.13□□□□□ -0.79
GTF2A1-204ENST00000556268 IGLV3-22A0A075B6J6 115 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 TBKBP1A7MCY6 615 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 hCG_1984214I3L0E3 225 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 HTR3BO95264 441 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 C22orf31O95567 290 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 HOXB8P17481 243 aaPredicted RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 AVPR2P30518 371 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 EIF4A3P38919 411 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 FAM160B1Q5W0V3 765 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 ANKRD54Q6NXT1 300 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 APOA5Q6Q788 366 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 FAM228AQ86W67 206 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 RAB11FIP4Q86YS3 637 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 LINC01465Q8N7H1 131 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 ZNF713Q8N859 430 aaPredicted RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 MRPS27Q92552 414 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 PGBD1Q96JS3 809 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 RPGRIP1Q96KN7 1286 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 HSPA12BQ96MM6 686 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 NEK1Q96PY6 1258 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 ANO3Q9BYT9 981 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 TMEM117Q9H0C3 514 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 ADAMTS10Q9H324 1103 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 ATP6V0A4Q9HBG4 840 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 ZNF302Q9NR11 478 aa10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 MBNL3Q9NUK0 354 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 PUF60Q9UHX1 559 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 PTPRZ1P23471 2315 aaPredicted RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 ZFHX2Q9C0A1 2572 aaPredicted RBP10.12□□□□□ -0.79
GTF2A1-204ENST00000556268 DENND3A2RUS2 1198 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 HIDE1A8MVS5 230 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 IPO5O00410 1097 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 MAGEB2O15479 319 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 PAX4O43316 350 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 EDIL3O43854 480 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 CSPG5O95196 566 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 FGFR1P11362 822 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 YARSP54577 528 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 NAPAP54920 295 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 KIZQ2M2Z5 673 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 MIS18BP1Q6P0N0 1132 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 KCNT2Q6UVM3 1135 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 SYNE3Q6ZMZ3 975 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 PLA2G4DQ86XP0 818 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 MRPL43Q8N983 215 aaKnown RBP10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 TMEM87AQ8NBN3 555 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 COX4I2Q96KJ9 171 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 TBC1D22BQ9NU19 505 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 KLHL3Q9UH77 587 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 GINS2Q9Y248 185 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 ST14Q9Y5Y6 855 aa10.11□□□□□ -0.79
GTF2A1-204ENST00000556268 A0A0U1RQF3 1178 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 H3BS24 57 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 ADAMTS3O15072 1205 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 LAG3P18627 525 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 CIITAP33076 1130 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 ZNF76P36508 570 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 ETV3P41162 512 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 ADCY7P51828 1080 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 PTPN21Q16825 1174 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 SPOUT1Q5T280 376 aaKnown RBP10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 THNSL1Q8IYQ7 743 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 RIPOR3Q96MK2 946 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 LRRC3Q9BY71 257 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 ZMYND12Q9H0C1 365 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 IRF2BPLQ9H1B7 796 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 ADAM7Q9H2U9 754 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 PRDM7Q9NQW5 492 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 SEMA3GQ9NS98 782 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 SPG21Q9NZD8 308 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 ADAMTS1Q9UHI8 967 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 PCDHA10Q9Y5I2 948 aa10.1□□□□□ -0.79
GTF2A1-204ENST00000556268 LOXHD1Q8IVV2 1947 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 FNDC1Q4ZHG4 1894 aaPredicted RBP10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 ESYT2A0FGR8 921 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 PROB1E7EW31 1015 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 DDX39AO00148 427 aaKnown RBP10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 ZBTB43O43298 467 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 GREM1O60565 184 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 DNAJA2O60884 412 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 VTNP04004 478 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 TECP42680 631 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 KIR3DL1P43629 444 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 RCAN1P53805 252 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 VCPP55072 806 aaKnown RBP10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 NLRP11P59045 1033 aaKnown RBP10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 KRT17Q04695 432 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 APOBRQ0VD83 1088 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms