RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 SPECC1Q5M775 1068 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 L1TD1Q5T7N2 865 aaKnown RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 TANGO2Q6ICL3 276 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 CENPPQ6IPU0 288 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 ARMCX5Q6P1M9 558 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 CRELD2Q6UXH1 353 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 ST13P5Q8NFI4 369 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 TCEAL4Q96EI5 215 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 LRRC3Q9BY71 257 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 BACH2Q9BYV9 841 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 FOXQ1Q9C009 403 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 MRPL44Q9H9J2 332 aaKnown RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 LTB4R2Q9NPC1 389 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 MRPS17Q9Y2R5 130 aaKnown RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 TIMM13Q9Y5L4 95 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 FRYLO94915 3013 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 DOCK6Q96HP0 2047 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 MTMR11A4FU01 709 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 MYMKA6NI61 221 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 K7ELQ4 463 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 PPEF2O14830 753 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 SPTLC1O15269 473 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 NCAM2O15394 837 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 LDHAP00338 332 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 PSMC3P17980 439 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 GARTP22102 1010 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 PNPLA4P41247 253 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 ALDH1A3P47895 512 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 TAF6P49848 677 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 GUCY2FP51841 1108 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 EPHB3P54753 998 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 DUSP4Q13115 394 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 ZNF852Q6ZMS4 543 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 DYMQ7RTS9 669 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 TMC8Q8IU68 726 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 C2orf15Q8WU43 125 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 POMGNT1Q8WZA1 660 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 IRF7Q92985 503 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 PSMG2Q969U7 264 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 FAM212AQ96EL1 285 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 CLIC6Q96NY7 704 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 ACCSQ96QU6 501 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 IER2Q9BTL4 223 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 TRMT61BQ9BVS5 477 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 PLA2G2FQ9BZM2 168 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 DNAJC25Q9H1X3 360 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 FBXO4Q9UKT5 387 aa13.74□□□□□ -0.21
HNRNPC-221ENST00000555883 WDR87Q6ZQQ6 2873 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 FAM170BA6NMN3 283 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 TISP43B9A030 160 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 MAN2B1O00754 1011 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 KIAA0391O15091 583 aaKnown RBP13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 STX6O43752 255 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 OR4Q2P0C623 313 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 SP9P0CG40 484 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 WEE1P30291 646 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 STAT6P42226 847 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 TUFMP49411 452 aaKnown RBP13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 C1orf228Q6PIY5 440 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 MAMSTRQ6ZN01 415 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 ITIH5Q86UX2 942 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 HS6ST3Q8IZP7 471 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 TMEM130Q8N3G9 435 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 MSANTD3Q96H12 275 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 ZNF560Q96MR9 790 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 LRRC27Q9C0I9 530 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 TMEM206Q9H813 350 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 DPP3Q9NY33 737 aa13.73□□□□□ -0.21
HNRNPC-221ENST00000555883 TSC2P49815 1807 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 SHISA7A6NL88 538 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 KPNA7A9QM74 516 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 NRG2O14511 850 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 PPP6R2O75170 966 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 GCNT3O95395 438 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 MYL4P12829 197 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 FCHO2Q0JRZ9 810 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 UBXN2BQ14CS0 331 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 SV2CQ496J9 727 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 FAM173BQ6P4H8 233 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 VITQ6UXI7 678 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 METTL23Q86XA0 190 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 MFSD6LQ8IWD5 586 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 BRSK2Q8IWQ3 736 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 EFCAB13Q8IY85 973 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 MAML2Q8IZL2 1156 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 THEM5Q8N1Q8 247 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 OR10T2Q8NGX3 314 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 SHKBP1Q8TBC3 707 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 ZSCAN18Q8TBC5 510 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 SPATA18Q8TC71 538 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms