RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 NAB2Q15742 525 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 PHLDB3Q6NSJ2 640 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 PDXDC1Q6P996 788 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 CYP26C1Q6V0L0 522 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 CCDC186Q7Z3E2 898 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 OR6B3Q8NGW1 331 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 LMO3Q8TAP4 145 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 SHC3Q92529 594 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 FAM84AQ96KN4 292 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 DNAJC7Q99615 494 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 BCO2Q9BYV7 579 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 TTYH3Q9C0H2 523 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 CISHQ9NSE2 258 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 RNF19AQ9NV58 838 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 VWA8A3KMH1 1905 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 SYN3O14994 580 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 TACC1O75410 805 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 GFPT2O94808 682 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 SERPING1P05155 500 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 FAM163BP0C2L3 166 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 ANXA13P27216 316 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 GATMP50440 423 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 FXR1P51114 621 aaKnown RBP eCLIP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 AFF1P51825 1210 aaKnown RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 ADKP55263 362 aaKnown RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 BCAR1P56945 870 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 JAM2P57087 298 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 SLC8A3P57103 927 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 TSPY1Q01534 308 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 CREMQ03060 361 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 TBX2Q13207 712 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 RAB30Q15771 203 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 KIAA1841Q6NSI8 718 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 PPP1R2P3Q6NXS1 205 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 TMEM270Q6UE05 265 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 UNC93AQ86WB7 457 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 CRIPAKQ8N1N5 446 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 RBBP8NLQ8NC74 664 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 HASPINQ8TF76 798 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 SENP8Q96LD8 212 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 BAG1Q99933 345 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 NT5C1AQ9BXI3 368 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 OXCT2Q9BYC2 517 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 SMYD3Q9H7B4 428 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 NRDE2Q9H7Z3 1164 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 APOBEC3GQ9HC16 384 aaKnown RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 SEPT11Q9NVA2 429 aaKnown RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 MIOSQ9NXC5 875 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 SPG21Q9NZD8 308 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 DNAJB4Q9UDY4 337 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 PUF60Q9UHX1 559 aaKnown RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 BARX2Q9UMQ3 279 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-220ENST00000555634 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 POLIQ9UNA4 740 aa11.96□□□□□ -0.49
SHMT2-220ENST00000555634 A8MXQ7 604 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 H7C4K7 107 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 NRP1O14786 923 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 PPEF2O14830 753 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 EPHB6O15197 1021 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 LPXNO60711 386 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 NOL4O94818 638 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 DDHD2O94830 711 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 PAEPP09466 180 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 WEE2P0C1S8 567 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 TYMPP19971 482 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 GNA15P30679 374 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 RAP1GAPP47736 663 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 SLC11A1P49279 550 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 EPHB4P54760 987 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 HTRA4P83105 476 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-220ENST00000555634 YWHAHQ04917 246 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-220ENST00000555634 INCA1Q0VD86 236 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 STILQ15468 1287 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 MAPRE1Q15691 268 aaKnown RBP11.95□□□□□ -0.5
SHMT2-220ENST00000555634 OVOS1Q6IE37 1185 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 ZNF280DQ6N043 979 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 KCNT2Q6UVM3 1135 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-220ENST00000555634 C16orf59Q7L2K0 433 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 ZNF677Q86XU0 584 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 ZNF280BQ86YH2 543 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 TMTC1Q8IUR5 882 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 COLGALT1Q8NBJ5 622 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 MSANTD4Q8NCY6 345 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 TATDN2Q93075 761 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 SUSD3Q96L08 255 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 CCDC42Q96M95 316 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 SAMD11Q96NU1 681 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 ARID3AQ99856 593 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 CXCL16Q9H2A7 254 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 AIPL1Q9NZN9 384 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 CXXC1Q9P0U4 656 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-220ENST00000555634 MSRAQ9UJ68 235 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 KIAA1257Q9ULG3 409 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 SSX2IPQ9Y2D8 614 aa11.95□□□□□ -0.5
SHMT2-220ENST00000555634 MRPL42Q9Y6G3 142 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms