RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ANKRD36BP1Q96IX9 119 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 C16orf70Q9BSU1 422 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 RPF1Q9H9Y2 349 aaKnown RBP25.8■■□□□ 1.72
TMEM260-207ENST00000555497 ZSWIM8A7E2V4 1837 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 GRIN2DO15399 1336 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 CCL15-CCL14A0A0B4J2E2 113 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 CCL15Q16663 113 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 SGO2Q562F6 1265 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 CPB2Q96IY4 423 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 PLVAPQ9BX97 442 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 PARVAQ9NVD7 372 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 PRMT7Q9NVM4 692 aaPredicted RBP25.8■■□□□ 1.72
TMEM260-207ENST00000555497 NXF1Q9UBU9 619 aaKnown RBP25.8■■□□□ 1.72
TMEM260-207ENST00000555497 CLEC11AQ9Y240 323 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 USTQ9Y2C2 406 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 TCRBV5S1A1TA0A578 114 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 LACTBL1A8MY62 500 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 CETPP11597 493 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 PHKA2P46019 1235 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 RAP1GAPP47736 663 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 CENPHQ9H3R5 247 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 R3HDM2Q9Y2K5 976 aaKnown RBP25.79■■□□□ 1.72
TMEM260-207ENST00000555497 SCINQ9Y6U3 715 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 STAG3L1P0CL83 205 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 TCF4P15884 667 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 GNGT1P63211 74 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 FAM187BQ17R55 369 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 KDM7AQ6ZMT4 941 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 C1orf127Q8N9H9 656 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 HEMGNQ9BXL5 484 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 AKT3Q9Y243 479 aa25.79■■□□□ 1.72
TMEM260-207ENST00000555497 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.79■■□□□ 1.72
TMEM260-207ENST00000555497 HMGB1P1B2RPK0 211 aaPredicted RBP25.78■■□□□ 1.72
TMEM260-207ENST00000555497 KRT19P08727 400 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 MYZAPP0CAP1 466 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 POU5F1BQ06416 359 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 ZNF252P-AS1Q0IIN9 211 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 UBAP2Q5T6F2 1119 aaKnown RBP25.78■■□□□ 1.72
TMEM260-207ENST00000555497 EMC10Q5UCC4 262 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 RHOT1Q8IXI2 618 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 PDZD7Q9H5P4 517 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 TMEM191CA6NGB0 347 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 RALAP11233 206 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 NR1D1P20393 614 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 JADE1Q6IE81 842 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.78■■□□□ 1.72
TMEM260-207ENST00000555497 EMID1Q96A84 441 aaPredicted RBP25.78■■□□□ 1.72
TMEM260-207ENST00000555497 RUNDC3BQ96NL0 473 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 SDCBP2Q9H190 292 aa25.78■■□□□ 1.72
TMEM260-207ENST00000555497 PSTPIP1O43586 416 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 IL18RAPO95256 599 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 ECEL1O95672 775 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 LSM8O95777 96 aaKnown RBP25.77■■□□□ 1.72
TMEM260-207ENST00000555497 CDH8P55286 799 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 PDCLQ13371 301 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 ATP13A4Q4VNC1 1196 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 IFNLR1Q8IU57 520 aaPredicted RBP25.77■■□□□ 1.72
TMEM260-207ENST00000555497 CXorf38Q8TB03 319 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 SLCO2A1Q92959 643 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 DCLK3Q9C098 648 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 MORF4L1Q9UBU8 362 aa25.77■■□□□ 1.72
TMEM260-207ENST00000555497 TP73O15350 636 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 MAGEB2O15479 319 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 GJC1P36383 396 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 OGDHQ02218 1023 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 KLF1Q13351 362 aaPredicted RBP25.76■■□□□ 1.71
TMEM260-207ENST00000555497 PPP1R2P3Q6NXS1 205 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 ART4Q93070 314 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 RNF25Q96BH1 459 aaPredicted RBP25.76■■□□□ 1.71
TMEM260-207ENST00000555497 SLC45A1Q9Y2W3 748 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 PASKQ96RG2 1323 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 IQCA1LA6NCM1 817 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 GOLGA6L10A6NI86 522 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 SHBGP04278 402 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 ARF4P18085 180 aaPredicted RBP25.76■■□□□ 1.71
TMEM260-207ENST00000555497 SSR1P43307 286 aaKnown RBP25.76■■□□□ 1.71
TMEM260-207ENST00000555497 PMS2P54278 862 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 DENND1BQ6P3S1 775 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 MTHFD1LQ6UB35 978 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 PNMA8AQ86V59 439 aaPredicted RBP25.76■■□□□ 1.71
TMEM260-207ENST00000555497 CCDC50Q8IVM0 306 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 KATNAL2Q8IYT4 538 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 TMEM35BQ8NCS4 154 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 PCDHGC3Q9UN70 934 aa25.76■■□□□ 1.71
TMEM260-207ENST00000555497 ERLIN2O94905 339 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 CDH5P33151 784 aaPredicted RBP25.75■■□□□ 1.71
TMEM260-207ENST00000555497 GTF2A2P52657 109 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 KRT17Q04695 432 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 SPDYCQ5MJ68 293 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 BCO2Q9BYV7 579 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 KLHL11Q9NVR0 708 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 IP6K2Q9UHH9 426 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 IVNS1ABPQ9Y6Y0 642 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 H3BRB1 525 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 EIF3HO15372 352 aaKnown RBP eCLIP25.75■■□□□ 1.71
TMEM260-207ENST00000555497 STRNO43815 780 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 ITGBL1O95965 494 aaPredicted RBP25.75■■□□□ 1.71
TMEM260-207ENST00000555497 CALB1P05937 261 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 MCF2P10911 925 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 SMPD1P17405 629 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms