RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CRHR1P34998 444 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 AVPR1BP47901 424 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 VPS72Q15906 364 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 C10orf62Q5T681 223 aaPredicted RBP6.63□□□□□ -1.35
VRK1-205ENST00000555402 SRLQ86TD4 932 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 SMC5Q8IY18 1101 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 REPS2Q8NFH8 660 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 OR5M3Q8NGP4 307 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 PLBD2Q8NHP8 589 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 NELL1Q92832 810 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 FAM167AQ96KS9 214 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 MRGPRX4Q96LA9 322 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 NT5C1BQ96P26 610 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 MYD88Q99836 296 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 PNPOQ9NVS9 261 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 TPCN1Q9ULQ1 816 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 A0A1W2PPL8 197 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 AMY1AP04745 511 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 SLC5A1P13866 664 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 MALP21145 153 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 PTH2RP49190 550 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 IFIT5Q13325 482 aaKnown RBP6.62□□□□□ -1.35
VRK1-205ENST00000555402 MORC3Q14149 939 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 SWSAP1Q6NVH7 229 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 PDZD4Q76G19 769 aaPredicted RBP6.62□□□□□ -1.35
VRK1-205ENST00000555402 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
VRK1-205ENST00000555402 FAM186BQ8IYM0 893 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 ZGPATQ8N5A5 531 aaKnown RBP6.62□□□□□ -1.35
VRK1-205ENST00000555402 LILRA3Q8N6C8 439 aaPredicted RBP6.62□□□□□ -1.35
VRK1-205ENST00000555402 FAM98AQ8NCA5 519 aaKnown RBP6.62□□□□□ -1.35
VRK1-205ENST00000555402 ACRBPQ8NEB7 543 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 MDM1Q8TC05 714 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 LINC00476Q8WZB0 136 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 CAVIN3Q969G5 261 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 COQ10AQ96MF6 247 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 DMRTA2Q96SC8 542 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 TBCBQ99426 244 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 ARPC5LQ9BPX5 153 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 NDC1Q9BTX1 674 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 KLHL11Q9NVR0 708 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 CALCOCO1Q9P1Z2 691 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 FEZ2Q9UHY8 353 aaPredicted RBP6.62□□□□□ -1.35
VRK1-205ENST00000555402 CPA4Q9UI42 421 aa6.62□□□□□ -1.35
VRK1-205ENST00000555402 NRP1O14786 923 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 TYRP14679 529 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 CASRP41180 1078 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 ZNF280AP59817 542 aaPredicted RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 NKX6-1P78426 367 aaPredicted RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 TLE1Q04724 770 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 PLS1Q14651 629 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 POLD3Q15054 466 aaPredicted RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 ERCC6LQ2NKX8 1250 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 LONRF3Q496Y0 759 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 TRMT2AQ8IZ69 625 aaKnown RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 SIMC1Q8NDZ2 872 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 OR52N2Q8NGI0 321 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 IFI44Q8TCB0 444 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 GJA10Q969M2 543 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 CPEB1Q9BZB8 566 aaKnown RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 ENKD1Q9H0I2 346 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 ZMAT3Q9HA38 289 aaKnown RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 SARS2Q9NP81 518 aaKnown RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 NLRC4Q9NPP4 1024 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 CNNM1Q9NRU3 951 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 TRPM5Q9NZQ8 1165 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 TAGLN3Q9UI15 199 aa6.61□□□□□ -1.35
VRK1-205ENST00000555402 RUVBL1Q9Y265 456 aaKnown RBP6.61□□□□□ -1.35
VRK1-205ENST00000555402 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
VRK1-205ENST00000555402 PHGDHO43175 533 aaKnown RBP6.6□□□□□ -1.35
VRK1-205ENST00000555402 RAP2AP10114 183 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 IL2RBP14784 551 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 FPR1P21462 350 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 APOBEC3AP31941 199 aaPredicted RBP6.6□□□□□ -1.35
VRK1-205ENST00000555402 HTR3AP46098 478 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 SEC24CP53992 1094 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 ELLP55199 621 aaPredicted RBP6.6□□□□□ -1.35
VRK1-205ENST00000555402 CREMQ03060 361 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 FOXI1Q12951 378 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 SNAPC2Q13487 334 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 ATP2B3Q16720 1220 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 FLYWCH1Q4VC44 716 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 PRAMEF14Q5SWL7 426 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 APOA5Q6Q788 366 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 FAM83AQ86UY5 434 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 SPICE1Q8N0Z3 855 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 LRRC27Q9C0I9 530 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 EPC1Q9H2F5 836 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 AKIP1Q9NQ31 210 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 MOCS1Q9NZB8 636 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 TESQ9UGI8 421 aaKnown RBP6.6□□□□□ -1.35
VRK1-205ENST00000555402 PCDHA1Q9Y5I3 950 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 SNX13Q9Y5W8 968 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 ACTL7AQ9Y615 435 aa6.6□□□□□ -1.35
VRK1-205ENST00000555402 RHPN2P1A8MT19 583 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 PROB1E7EW31 1015 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 NCR1O76036 304 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 KITP10721 976 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 PCSK1P29120 753 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms