RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ARMCX5Q6P1M9 558 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 RNF19BQ6ZMZ0 732 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 METTL23Q86XA0 190 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 THEM5Q8N1Q8 247 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 GPD1LQ8N335 351 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 LRRC52Q8N7C0 313 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 PRSS33Q8NF86 280 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 C2orf15Q8WU43 125 aaKnown RBP12.79□□□□□ -0.36
VRK1-204ENST00000555351 RSAD2Q8WXG1 361 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 BORCS6Q96GS4 357 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 ZNF512Q96ME7 567 aaPredicted RBP12.79□□□□□ -0.36
VRK1-204ENST00000555351 GPR88Q9GZN0 384 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 IKZF4Q9H2S9 585 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 ITGA11Q9UKX5 1188 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 ATP6V1DQ9Y5K8 247 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 KPNA7A9QM74 516 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 CYB561D2O14569 222 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 GALR2O43603 387 aaPredicted RBP12.78□□□□□ -0.36
VRK1-204ENST00000555351 PRPF6O94906 941 aaKnown RBP12.78□□□□□ -0.36
VRK1-204ENST00000555351 FGF19O95750 216 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 MYL1P05976 194 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 SLFN14P0C7P3 912 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 NPR3P17342 541 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 PFKPQ01813 784 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 DNM1Q05193 864 aaKnown RBP12.78□□□□□ -0.36
VRK1-204ENST00000555351 PKP1Q13835 747 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 BMT2Q1RMZ1 405 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 IER5LQ5T953 404 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
VRK1-204ENST00000555351 CENPPQ6IPU0 288 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 PARM1Q6UWI2 310 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 SIX5Q8N196 739 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
VRK1-204ENST00000555351 FGF14Q92915 247 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 SHDQ96IW2 340 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 CORO1BQ9BR76 489 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 CBWD1Q9BRT8 395 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 YIPF1Q9Y548 306 aa12.78□□□□□ -0.36
VRK1-204ENST00000555351 TIMM13Q9Y5L4 95 aaPredicted RBP12.78□□□□□ -0.36
VRK1-204ENST00000555351 ZDBF2Q9HCK1 2354 aa12.77□□□□□ -0.36
VRK1-204ENST00000555351 MTMR11A4FU01 709 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 NARSO43776 548 aaKnown RBP12.77□□□□□ -0.37
VRK1-204ENST00000555351 VNN2O95498 520 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 CMA1P23946 247 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 HOXD13P35453 343 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 ALDH1A3P47895 512 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
VRK1-204ENST00000555351 EPHB3P54753 998 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 KRT85P78386 507 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 TWF1Q12792 350 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 TCF15Q12870 199 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 SLC5A9Q2M3M2 681 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 CWF19L1Q69YN2 538 aaKnown RBP12.77□□□□□ -0.37
VRK1-204ENST00000555351 PDZD4Q76G19 769 aaPredicted RBP12.77□□□□□ -0.37
VRK1-204ENST00000555351 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 C12orf56Q8IXR9 622 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 CEP57L1Q8IYX8 460 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 TMEM105Q8N8V8 129 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 C1orf127Q8N9H9 656 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 CXorf38Q8TB03 319 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 TMEM174Q8WUU8 243 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 SAAL1Q96ER3 474 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 ZCWPW1Q9H0M4 648 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 TRPV4Q9HBA0 871 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 ASAH2Q9NR71 780 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 CEP72Q9P209 647 aa12.77□□□□□ -0.37
VRK1-204ENST00000555351 FAM237AA0A1B0GTK4 181 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 TGFB1I1O43294 461 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 CFHP08603 1231 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 STARD6P59095 220 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 RBP5P82980 135 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 TFAMQ00059 246 aaKnown RBP12.76□□□□□ -0.37
VRK1-204ENST00000555351 PRKCQQ04759 706 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 DUSP4Q13115 394 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 PSMD2Q13200 908 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 HS2ST1Q7LGA3 356 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 ITIH5Q86UX2 942 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 WDR49Q8IV35 697 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 DCP1BQ8IZD4 617 aaKnown RBP12.76□□□□□ -0.37
VRK1-204ENST00000555351 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 GOLGA5Q8TBA6 731 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 SPPL2BQ8TCT7 592 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 GPR152Q8TDT2 470 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
VRK1-204ENST00000555351 E2F7Q96AV8 911 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 ANKRD36BP1Q96IX9 119 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
VRK1-204ENST00000555351 ARHGEF3Q9NR81 526 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 HSPBP1Q9NZL4 362 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 ZMYM5Q9UJ78 669 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 SCN1AP35498 2009 aa12.76□□□□□ -0.37
VRK1-204ENST00000555351 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms