RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TKTP29401 623 aaKnown RBP13.61□□□□□ -0.23
SYNE2-219ENST00000555323 NOP14P78316 857 aaKnown RBP13.61□□□□□ -0.23
SYNE2-219ENST00000555323 BMS1Q14692 1282 aaKnown RBP13.61□□□□□ -0.23
SYNE2-219ENST00000555323 NR1I3Q14994 352 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 SOWAHAQ2M3V2 549 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 ZNF699Q32M78 642 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 WDR44Q5JSH3 913 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 RTP2Q5QGT7 225 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 SMYD5Q6GMV2 418 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 DPY19L2P1Q6NXN4 242 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 PDXDC1Q6P996 788 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 GBP6Q6ZN66 633 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 TMEM86AQ8N2M4 240 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 RNF214Q8ND24 703 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 MRPL38Q96DV4 380 aaKnown RBP13.61□□□□□ -0.23
SYNE2-219ENST00000555323 PI4K2AQ9BTU6 479 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 OXCT2Q9BYC2 517 aaPredicted RBP13.61□□□□□ -0.23
SYNE2-219ENST00000555323 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 IMPG2Q9BZV3 1241 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 RBSNQ9H1K0 784 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 FAM124BQ9H5Z6 455 aaPredicted RBP13.61□□□□□ -0.23
SYNE2-219ENST00000555323 RXFP1Q9HBX9 757 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
SYNE2-219ENST00000555323 BACE2Q9Y5Z0 518 aa13.61□□□□□ -0.23
SYNE2-219ENST00000555323 CHD9Q3L8U1 2897 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 A0A1B0GTH6 734 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 HUS1O60921 280 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 CXCL14O95715 111 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 ODC1P11926 461 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 P4HA1P13674 534 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 PON1P27169 355 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 GLUD2P49448 558 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 FANCCQ00597 558 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 YWHAHQ04917 246 aaPredicted RBP13.6□□□□□ -0.23
SYNE2-219ENST00000555323 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 PTPROQ16827 1216 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 VARS2Q5ST30 1063 aaKnown RBP13.6□□□□□ -0.23
SYNE2-219ENST00000555323 WSCD1Q658N2 575 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 SPOPLQ6IQ16 392 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 ANKS3Q6ZW76 656 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 TMC7Q7Z402 723 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 NLRC5Q86WI3 1866 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 PDCL2Q8N4E4 241 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 GDPD5Q8WTR4 605 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 TATDN2Q93075 761 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 NAP1L5Q96NT1 182 aaPredicted RBP13.6□□□□□ -0.23
SYNE2-219ENST00000555323 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 CYP3A43Q9HB55 503 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.6□□□□□ -0.23
SYNE2-219ENST00000555323 MRPL17Q9NRX2 175 aaKnown RBP13.6□□□□□ -0.23
SYNE2-219ENST00000555323 FNIP2Q9P278 1114 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 L1RE1Q9UN81 338 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 CHD7Q9P2D1 2997 aa13.6□□□□□ -0.23
SYNE2-219ENST00000555323 C2orf71A6NGG8 1288 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 H7C4K7 107 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 C1RP00736 705 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 URODP06132 367 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 SLC9A1P19634 815 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 WARSP23381 471 aaKnown RBP13.59□□□□□ -0.23
SYNE2-219ENST00000555323 IRS1P35568 1242 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 ASPAP45381 313 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 LHX1P48742 406 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 TNNC1P63316 161 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
SYNE2-219ENST00000555323 FILIP1LQ4L180 1135 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 FKBP15Q5T1M5 1219 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 PHLDB3Q6NSJ2 640 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 TRIM65Q6PJ69 517 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 METTL23Q86XA0 190 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 CEP57Q86XR8 500 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 KBTBD7Q8WVZ9 684 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 JAKMIP2Q96AA8 810 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 B3GALT6Q96L58 329 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 FAM81BQ96LP2 452 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 ERGIC2Q96RQ1 377 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 MMS19Q96T76 1030 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 NIF3L1Q9GZT8 377 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 GCNT4Q9P109 453 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 MTRRQ9UBK8 725 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 NXF1Q9UBU9 619 aaKnown RBP13.59□□□□□ -0.23
SYNE2-219ENST00000555323 POLIQ9UNA4 740 aa13.59□□□□□ -0.23
SYNE2-219ENST00000555323 TIMM13Q9Y5L4 95 aaPredicted RBP13.59□□□□□ -0.23
SYNE2-219ENST00000555323 SERPINC1P01008 464 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 TBXAS1P24557 533 aaPredicted RBP13.58□□□□□ -0.24
SYNE2-219ENST00000555323 UBASH3AP57075 661 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 GCNT1Q02742 428 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 CREMQ03060 361 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 UBXN1Q04323 297 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 ADGRE1Q14246 886 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 UVSSAQ2YD98 709 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 OVOS1Q6IE37 1185 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 SLC8B1Q6J4K2 584 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 THEM5Q8N1Q8 247 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 TTC39CQ8N584 583 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 MICAL1Q8TDZ2 1067 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
SYNE2-219ENST00000555323 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms