RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LPXNO60711 386 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 CYP11A1P05108 521 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 DNAJB1P25685 340 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 TKTP29401 623 aaKnown RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 ERVFC1P60507 584 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 YWHAHQ04917 246 aaPredicted RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 SMC1AQ14683 1233 aaKnown RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 RTP2Q5QGT7 225 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 KIAA0319Q5VV43 1072 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 APTXQ7Z2E3 356 aaKnown RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 RIN2Q8WYP3 895 aaPredicted RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 PIK3R5Q8WYR1 880 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 MRPL38Q96DV4 380 aaKnown RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 NT5C1BQ96P26 610 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 PI4K2AQ9BTU6 479 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 OXCT2Q9BYC2 517 aaPredicted RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 NIF3L1Q9GZT8 377 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHD8-208ENST00000555301 L1RE1Q9UN81 338 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 IRAK3Q9Y616 596 aa15.32■□□□□ 0.04
CHD8-208ENST00000555301 TDRD15B5MCY1 1934 aaKnown RBP15.32■□□□□ 0.04
CHD8-208ENST00000555301 H7C4K7 107 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 FSCN2O14926 492 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 TACC1O75410 805 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 OAZ2O95190 189 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 CXCL14O95715 111 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 FXR1P51114 621 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHD8-208ENST00000555301 FANCCQ00597 558 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 CAMK1Q14012 370 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 PTPN14Q15678 1187 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 SOWAHAQ2M3V2 549 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 VARS2Q5ST30 1063 aaKnown RBP15.31■□□□□ 0.04
CHD8-208ENST00000555301 OVOS1Q6IE37 1185 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 SPOPLQ6IQ16 392 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 ZNF280DQ6N043 979 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 LIMS2Q7Z4I7 341 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 PDCL2Q8N4E4 241 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 MRPL43Q8N983 215 aaKnown RBP15.31■□□□□ 0.04
CHD8-208ENST00000555301 LMO3Q8TAP4 145 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 B3GALT6Q96L58 329 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 FAM81BQ96LP2 452 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 FAM161BQ96MY7 647 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
CHD8-208ENST00000555301 FAM124BQ9H5Z6 455 aaPredicted RBP15.31■□□□□ 0.04
CHD8-208ENST00000555301 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
CHD8-208ENST00000555301 TIMM13Q9Y5L4 95 aaPredicted RBP15.31■□□□□ 0.04
CHD8-208ENST00000555301 ANK1P16157 1881 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 TRIOBPQ9H2D6 2365 aa15.31■□□□□ 0.04
CHD8-208ENST00000555301 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.3■□□□□ 0.04
CHD8-208ENST00000555301 C2CD2LO14523 706 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 LILRB3O75022 631 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 LRRN2O75325 713 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 TBXAS1P24557 533 aaPredicted RBP15.3■□□□□ 0.04
CHD8-208ENST00000555301 CA8P35219 290 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 LHX1P48742 406 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 UBXN1Q04323 297 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 MRPL58Q14197 206 aaKnown RBP15.3■□□□□ 0.04
CHD8-208ENST00000555301 PDCD11Q14690 1871 aaKnown RBP15.3■□□□□ 0.04
CHD8-208ENST00000555301 PSMD5Q16401 504 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 PLPP4Q5VZY2 271 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 WSCD1Q658N2 575 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 TRIM65Q6PJ69 517 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 GAS2L3Q86XJ1 694 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 ADGRF2Q8IZF7 708 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 THEM5Q8N1Q8 247 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 TTC39CQ8N584 583 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 LNX1Q8TBB1 728 aaPredicted RBP15.3■□□□□ 0.04
CHD8-208ENST00000555301 GBF1Q92538 1859 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 PPP2R3CQ969Q6 453 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 GAS2L1Q99501 681 aaPredicted RBP15.3■□□□□ 0.04
CHD8-208ENST00000555301 EMILIN2Q9BXX0 1053 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 RBSNQ9H1K0 784 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 CYP3A43Q9HB55 503 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 RXFP1Q9HBX9 757 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 RTN4Q9NQC3 1192 aaKnown RBP15.3■□□□□ 0.04
CHD8-208ENST00000555301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHD8-208ENST00000555301 FNIP2Q9P278 1114 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 POLIQ9UNA4 740 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 BACE2Q9Y5Z0 518 aa15.3■□□□□ 0.04
CHD8-208ENST00000555301 A0A1B0GTH6 734 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 TPM3P06753 285 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 SLC9A1P19634 815 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 POU3F3P20264 500 aaPredicted RBP15.29■□□□□ 0.04
CHD8-208ENST00000555301 WARSP23381 471 aaKnown RBP15.29■□□□□ 0.04
CHD8-208ENST00000555301 PON1P27169 355 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 IRS1P35568 1242 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 ASPAP45381 313 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 UBASH3AP57075 661 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 GCNT1Q02742 428 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 LRMPQ12912 555 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 CTXN3Q4LDR2 81 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 SCARA5Q6ZMJ2 495 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 DEFB123Q8N688 67 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 AUTS2Q8WXX7 1259 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 TATDN2Q93075 761 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 BCO2Q9BYV7 579 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 SNX25Q9H3E2 840 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 MTRRQ9UBK8 725 aa15.29■□□□□ 0.04
CHD8-208ENST00000555301 C2orf71A6NGG8 1288 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms