RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 ZNF623O75123 536 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 LRRN2O75325 713 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 CST3P01034 146 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ITGB3P05106 788 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 KRT5P13647 590 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 KCNE1P15382 129 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 FOSL2P15408 326 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ATF7P17544 494 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 IGFBP4P22692 258 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 PRKCIP41743 596 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 MYO1EQ12965 1108 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 CUL2Q13617 745 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 MTF1Q14872 753 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 E4F1Q66K89 784 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ALKAL1Q6UXT8 129 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 TOGARAM2Q6ZUX3 1019 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 MRPL10Q7Z7H8 261 aaKnown RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 C17orf53Q8N3J3 647 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 C1orf127Q8N9H9 656 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ZNF689Q96CS4 500 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 FAXDC2Q96IV6 333 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 RPS6KC1Q96S38 1066 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 GAS2L1Q99501 681 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 EIF3CQ99613 913 aaKnown RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 TRAIPQ9BWF2 469 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ELAC1Q9H777 363 aaKnown RBP18.88■□□□□ 0.61
PSEN1-212ENST00000555254 KLK14Q9P0G3 267 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ARHGAP20Q9P2F6 1191 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 AGAP1Q9UPQ3 857 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 ADGRG1Q9Y653 693 aa18.88■□□□□ 0.61
PSEN1-212ENST00000555254 EPOPA6NHQ4 379 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 TNFAIP3P21580 790 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 POLR2BP30876 1174 aaKnown RBP18.87■□□□□ 0.61
PSEN1-212ENST00000555254 ERVK-21P61565 698 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 CHD9Q3L8U1 2897 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 MICAL3Q7RTP6 2002 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 KIAA1328Q86T90 577 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 GPIHBP1Q8IV16 184 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 CMTR2Q8IYT2 770 aaKnown RBP18.87■□□□□ 0.61
PSEN1-212ENST00000555254 ABI1Q8IZP0 508 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 SHC3Q92529 594 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 LPPQ93052 612 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 HPDLQ96IR7 371 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 KREMEN1Q96MU8 473 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 DESI2Q9BSY9 194 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 RNF39Q9H2S5 420 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 HAUS4Q9H6D7 363 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 SLC38A7Q9NVC3 462 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 NUB1Q9Y5A7 615 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 PCDHB4Q9Y5E5 795 aa18.87■□□□□ 0.61
PSEN1-212ENST00000555254 MRPL42Q9Y6G3 142 aaKnown RBP18.87■□□□□ 0.61
PSEN1-212ENST00000555254 SMIM28A0A1B0GU29 152 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 MEFVO15553 781 aaPredicted RBP18.86■□□□□ 0.61
PSEN1-212ENST00000555254 EOMESO95936 686 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 CYP3A5P20815 502 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 KIF11P52732 1056 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 XKR4Q5GH76 650 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 SPOUT1Q5T280 376 aaKnown RBP18.86■□□□□ 0.61
PSEN1-212ENST00000555254 HGSNATQ68CP4 663 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 SPOPLQ6IQ16 392 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 FAM71AQ8IYT1 594 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 FBXO22Q8NEZ5 403 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 KAT5Q92993 513 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 RC3H2Q9HBD1 1191 aaKnown RBP18.86■□□□□ 0.61
PSEN1-212ENST00000555254 APOBEC3GQ9HC16 384 aaKnown RBP18.86■□□□□ 0.61
PSEN1-212ENST00000555254 SPTLC3Q9NUV7 552 aa18.86■□□□□ 0.61
PSEN1-212ENST00000555254 HOXA2O43364 376 aa18.85■□□□□ 0.61
PSEN1-212ENST00000555254 PLEKP08567 350 aaPredicted RBP18.85■□□□□ 0.61
PSEN1-212ENST00000555254 CTNNB1P35222 781 aa18.85■□□□□ 0.61
PSEN1-212ENST00000555254 TNNC1P63316 161 aa18.85■□□□□ 0.61
PSEN1-212ENST00000555254 ZBTB6Q15916 424 aa18.85■□□□□ 0.61
PSEN1-212ENST00000555254 C10orf76Q5T2E6 689 aa18.85■□□□□ 0.61
PSEN1-212ENST00000555254 ZNF598Q86UK7 904 aaKnown RBP18.85■□□□□ 0.61
PSEN1-212ENST00000555254 GPR88Q9GZN0 384 aa18.85■□□□□ 0.61
PSEN1-212ENST00000555254 NXF1Q9UBU9 619 aaKnown RBP18.85■□□□□ 0.61
PSEN1-212ENST00000555254 SIX4Q9UIU6 781 aa18.85■□□□□ 0.61
PSEN1-212ENST00000555254 PTPRSQ13332 1948 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 CYP26A1O43174 497 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 STAU1O95793 577 aaKnown RBP18.84■□□□□ 0.61
PSEN1-212ENST00000555254 PNMA6AP0CW24 399 aaPredicted RBP18.84■□□□□ 0.61
PSEN1-212ENST00000555254 PNPLA4P41247 253 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 MAGEA1P43355 309 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 PTK2Q05397 1052 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 GLRA4Q5JXX5 417 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 CLLU1OSQ5K130 101 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 ZNF571Q7Z3V5 609 aaPredicted RBP18.84■□□□□ 0.61
PSEN1-212ENST00000555254 MICALL1Q8N3F8 863 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 TTC39CQ8N584 583 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 LRRC52Q8N7C0 313 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 ACRBPQ8NEB7 543 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 MAFAQ8NHW3 353 aaPredicted RBP18.84■□□□□ 0.61
PSEN1-212ENST00000555254 GDPD5Q8WTR4 605 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 PPM1EQ8WY54 764 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 PPP1R13BQ96KQ4 1090 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 ZNF560Q96MR9 790 aa18.84■□□□□ 0.61
PSEN1-212ENST00000555254 ZMAT2Q96NC0 199 aaKnown RBP18.84■□□□□ 0.61
PSEN1-212ENST00000555254 CASD1Q96PB1 797 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms