RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 RPS6P62753 249 aaKnown RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 IRX3P78415 501 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 NUCB2P80303 420 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 MRPS9P82933 396 aaKnown RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 TRIM29Q14134 588 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 HSP90AA2PQ14568 343 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 LETM2Q2VYF4 491 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 MTERF2Q49AM1 385 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 TTC38Q5R3I4 469 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 ANO1Q5XXA6 986 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 ZC3H14Q6PJT7 736 aaKnown RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 CPLX2Q6PUV4 134 aaKnown RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 LBX2Q6XYB7 198 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 RNF207Q6ZRF8 634 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 TRMT1LQ7Z2T5 733 aaKnown RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 ANKRD23Q86SG2 305 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 FAM160B2Q86V87 743 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 NOSTRINQ8IVI9 506 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 LRRC56Q8IYG6 542 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 GRAMD1CQ8IYS0 662 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 ST13P5Q8NFI4 369 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 CHURC1Q8WUH1 139 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 LPAR1Q92633 364 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 STAMQ92783 540 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 NOX5Q96PH1 765 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 DEPDC7Q96QD5 511 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 SH2D3AQ9BRG2 576 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 LZTS2Q9BRK4 669 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 WDR11Q9BZH6 1224 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 SPATC1LQ9H0A9 340 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 CCDC113Q9H0I3 377 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 EPN3Q9H201 632 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 SH2D4AQ9H788 454 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 PSTPIP2Q9H939 334 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 C6orf50Q9HD87 102 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 RIC8AQ9NPQ8 531 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 A1CFQ9NQ94 594 aaKnown RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.56□□□□□ -1.849e-6■□□□□ 10.4
SEC23A-208ENST00000555017 FLRT1Q9NZU1 646 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 FBXO2Q9UK22 296 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 DBR1Q9UK59 544 aaKnown RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 PCDHA7Q9UN72 937 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 GABRQQ9UN88 632 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 TIMM13Q9Y5L4 95 aaPredicted RBP3.56□□□□□ -1.84
SEC23A-208ENST00000555017 NPFFR2Q9Y5X5 522 aa3.56□□□□□ -1.84
SEC23A-208ENST00000555017 TRIP12Q14669 1992 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 TRAV20A0A0B4J274 112 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 A0A1B0GTL3 188 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CCDC194A0A1B0GVG4 234 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 A0A1B0GVL5 298 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 TMEM150BA6NC51 233 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 VWA3AA6NCI4 1184 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 TCAF2A6NFQ2 919 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 RASSF10A6NK89 507 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 GCOM1H8Y6P7 765 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 N4BP3O15049 544 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 MSH4O15457 936 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 ADCY6O43306 1168 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CCNT1O60563 726 aaKnown RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 PLA2G6O60733 806 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 ARIH2O95376 493 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CPP00450 1065 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 PLA2G1BP04054 148 aaKnown RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 POLR2MP0CAP2 368 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 COL6A2P12110 1019 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 IGFBP6P24592 240 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 HSD17B4P51659 736 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CORO7P57737 925 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 RPL11P62913 178 aaKnown RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 FKBP1BP68106 108 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 SP2Q02086 613 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 SP4Q02446 784 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 MAP4K2Q12851 820 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 NR1I3Q14994 352 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 PGM5Q15124 567 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 STK38Q15208 465 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 ZRSR1Q15695 479 aaKnown RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CAMK4Q16566 473 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 ACBD5Q5T8D3 534 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 E4F1Q66K89 784 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 ISM2Q6H9L7 571 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 SHC4Q6S5L8 630 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 SEPT14Q6ZU15 432 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 FASTKD5Q7L8L6 764 aaKnown RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 KCNK18Q7Z418 384 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 FAM129CQ86XR2 697 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 RIOX2Q8IUF8 465 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CCAR1Q8IX12 1150 aaKnown RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 LINC00301Q8NCQ3 95 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CD99L2Q8TCZ2 262 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 SMCR8Q8TEV9 937 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 SREK1Q8WXA9 508 aaKnown RBP3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CRYGNQ8WXF5 182 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 KCTD13Q8WZ19 329 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 WASF1Q92558 559 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 HAS1Q92839 578 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 CUL5Q93034 780 aa3.55□□□□□ -1.84
SEC23A-208ENST00000555017 LENG9Q96B70 501 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms