RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CTAGE8P0CG41 777 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 CYP11B2P19099 503 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 ANXA13P27216 316 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 VAV2P52735 878 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 PRKCEQ02156 737 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 CSTF1Q05048 431 aaKnown RBP12.01□□□□□ -0.49
SHMT2-216ENST00000554975 HTR4Q13639 388 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 NOMO2Q5JPE7 1267 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 MIIPQ5JXC2 388 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 CCDC70Q6NSX1 233 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 RSRC2Q7L4I2 434 aaKnown RBP12.01□□□□□ -0.49
SHMT2-216ENST00000554975 TAS1R1Q7RTX1 841 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 CTAGE6Q86UF2 777 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 CTAGE4Q8IX94 777 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 SLC35F6Q8N357 371 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 SYN2Q92777 582 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-216ENST00000554975 CCDC42Q96M95 316 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 EMILIN2Q9BXX0 1053 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 DEF6Q9H4E7 631 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 SLC2A4RGQ9NR83 387 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 CEP72Q9P209 647 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 SEL1LQ9UBV2 794 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-216ENST00000554975 KIAA1024Q9UPX6 916 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 NUMBLQ9Y6R0 609 aa12.01□□□□□ -0.49
SHMT2-216ENST00000554975 SPTLC1O15269 473 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 EIF3DO15371 548 aaKnown RBP eCLIP12□□□□□ -0.49
SHMT2-216ENST00000554975 SLC16A3O15427 465 aaKnown RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 ZNF862O60290 1169 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 OATP04181 439 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 SPATA31D3P0C874 917 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 LAMP2P13473 410 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 RPL13P26373 211 aaKnown RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 ARHGAP25P42331 645 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 STARD6P59095 220 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 KIF5AQ12840 1032 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 GPS2Q13227 327 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 UGCGQ16739 394 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 BMT2Q1RMZ1 405 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 ZNF528Q3MIS6 628 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 CCDC122Q5T0U0 273 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 NCAPH2Q6IBW4 605 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 TSSK4Q6SA08 328 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 SPATA31D4Q6ZUB0 917 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 CACNA2D4Q7Z3S7 1137 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 SYT2Q8N9I0 419 aaPredicted RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 ZBTB44Q8NCP5 570 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 TRIM58Q8NG06 486 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 SMG7Q92540 1137 aaKnown RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 RTKNQ9BST9 563 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 ACBD3Q9H3P7 528 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 METTL14Q9HCE5 456 aaKnown RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 ARFGAP3Q9NP61 516 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 SPATA6Q9NWH7 488 aaPredicted RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 NOL12Q9UGY1 213 aaKnown RBP eCLIP12□□□□□ -0.49
SHMT2-216ENST00000554975 MYO6Q9UM54 1294 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 USP18Q9UMW8 372 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 SIK3Q9Y2K2 1263 aa12□□□□□ -0.49
SHMT2-216ENST00000554975 V9GYY5 206 aaPredicted RBP12□□□□□ -0.49
SHMT2-216ENST00000554975 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 PRR5-ARHGAP8B1AHC4 643 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 MAGEB2O15479 319 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 TEX28O15482 410 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 LAMTOR5O43504 91 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 LILRB5O75023 590 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 TACC1O75410 805 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 HOXB3P14651 431 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-216ENST00000554975 CD72P21854 359 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 SDHBP21912 280 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 CLCN6P51797 869 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 SLC12A3P55017 1021 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 GPC5P78333 572 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 ARHGAP8P85298 464 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 LMNB2Q03252 620 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 RNASELQ05823 741 aaKnown RBP11.99□□□□□ -0.49
SHMT2-216ENST00000554975 SPIRE1Q08AE8 756 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 ALCAMQ13740 583 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 COL9A2Q14055 689 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-216ENST00000554975 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 MAP9Q49MG5 647 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 PPM1JQ5JR12 505 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 UBE2Q2Q8WVN8 375 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 NLRP7Q8WX94 980 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 FGF14Q92915 247 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 NXPE3Q969Y0 559 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 SCLT1Q96NL6 688 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 DDX23Q9BUQ8 820 aaKnown RBP11.99□□□□□ -0.49
SHMT2-216ENST00000554975 EPC1Q9H2F5 836 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 OLFML3Q9NRN5 406 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 FBXO4Q9UKT5 387 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 PCDHGA2Q9Y5H1 932 aa11.99□□□□□ -0.49
SHMT2-216ENST00000554975 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.99□□□□□ -0.49
SHMT2-216ENST00000554975 KANSL1LA0AUZ9 987 aa11.98□□□□□ -0.49
SHMT2-216ENST00000554975 F8W810 466 aa11.98□□□□□ -0.49
SHMT2-216ENST00000554975 PDXKO00764 312 aa11.98□□□□□ -0.49
SHMT2-216ENST00000554975 LCA5LO95447 670 aa11.98□□□□□ -0.49
SHMT2-216ENST00000554975 TMOD1P28289 359 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms