RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 LINC01599Q8WXQ3 324 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 GPRASP2Q96D09 838 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 ATP6V1G3Q96LB4 118 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 POLR3CQ9BUI4 534 aaPredicted RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 APOL5Q9BWW9 433 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 EPN3Q9H201 632 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 OLFML3Q9NRN5 406 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 FAM114A2Q9NRY5 505 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 RBM12Q9NTZ6 932 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 TYW1Q9NV66 732 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 DNM3Q9UQ16 869 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 TELO2Q9Y4R8 837 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 C2orf16Q68DN1 1984 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 SPATA31C2B4DYI2 1134 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 EML1O00423 815 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 FSCN2O14926 492 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 EPHB6O15197 1021 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 DHX15O43143 795 aaKnown RBP11.91□□□□□ -0.5
SRP54-205ENST00000554803 GAS7O60861 476 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 KIF4AO95239 1232 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 KRT18P05783 430 aaKnown RBP11.91□□□□□ -0.5
SRP54-205ENST00000554803 ASGR2P07307 311 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 KCNA2P16389 499 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 NPR3P17342 541 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 CYP11B2P19099 503 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 UBA1P22314 1058 aaKnown RBP11.91□□□□□ -0.5
SRP54-205ENST00000554803 GNGT1P63211 74 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 NEDD9Q14511 834 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 TCEAL1Q15170 157 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 EXOC3L4Q17RC7 722 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 FBXO47Q5MNV8 452 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 EPM2AIP1Q7L775 607 aaPredicted RBP11.91□□□□□ -0.5
SRP54-205ENST00000554803 SLFN11Q7Z7L1 901 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 NLRX1Q86UT6 975 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 GPBP1Q86WP2 473 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 RASGEF1CQ8N431 466 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 SYT2Q8N9I0 419 aaPredicted RBP11.91□□□□□ -0.5
SRP54-205ENST00000554803 TMEM174Q8WUU8 243 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 SEC14L1Q92503 715 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 RUNDC3BQ96NL0 473 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 NECTIN4Q96NY8 510 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 SPAG5Q96R06 1193 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 HINFPQ9BQA5 517 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 RAB17Q9H0T7 212 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 UNC45AQ9H3U1 944 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 POMKQ9H5K3 350 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 YY1AP1Q9H869 796 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 CNOT10Q9H9A5 744 aaKnown RBP11.91□□□□□ -0.5
SRP54-205ENST00000554803 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
SRP54-205ENST00000554803 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRP54-205ENST00000554803 CDH22Q9UJ99 828 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 NENFQ9UMX5 172 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 R4GN57 208 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 ZFYVE26Q68DK2 2539 aa11.91□□□□□ -0.5
SRP54-205ENST00000554803 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
SRP54-205ENST00000554803 NDUFAB1O14561 156 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 SART1O43290 800 aaKnown RBP11.9□□□□□ -0.5
SRP54-205ENST00000554803 CHMP2AO43633 222 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 PPP1R37O75864 691 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 H2AFZP0C0S5 128 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 MYZAPP0CAP1 466 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 STAG3L1P0CL83 205 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 NR1D1P20393 614 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 NR2F2P24468 414 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 HADHBP55084 474 aaKnown RBP11.9□□□□□ -0.5
SRP54-205ENST00000554803 KCNH2Q12809 1159 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 ICE2Q659A1 982 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 B3GNT9Q6UX72 402 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 MMS22LQ6ZRQ5 1243 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 TSHZ1Q6ZSZ6 1077 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 H2AFVQ71UI9 128 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 RTN4RL1Q86UN2 441 aaPredicted RBP11.9□□□□□ -0.5
SRP54-205ENST00000554803 ZDHHC14Q8IZN3 488 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 SCFD1Q8WVM8 642 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 ZIM3Q96PE6 472 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 CEP89Q96ST8 783 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 SENP7Q9BQF6 1050 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 TEKT3Q9BXF9 490 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 EPB41L5Q9HCM4 733 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 FAM169AQ9Y6X4 670 aa11.9□□□□□ -0.5
SRP54-205ENST00000554803 MIA3Q5JRA6 1907 aa11.9□□□□□ -0.51
SRP54-205ENST00000554803 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.51
SRP54-205ENST00000554803 NCANO14594 1321 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 NOP56O00567 594 aaKnown RBP11.89□□□□□ -0.51
SRP54-205ENST00000554803 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
SRP54-205ENST00000554803 MED24O75448 989 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 FGF18O76093 207 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 FSBPO95073 299 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 FAM107AO95990 144 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 CCNE2O96020 404 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 PAEPP09466 180 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 UCHL3P15374 230 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 GUCY2DQ02846 1103 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 PPP2R5CQ13362 524 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 ALCAMQ13740 583 aa11.89□□□□□ -0.51
SRP54-205ENST00000554803 PPP2R5AQ15172 486 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms