RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SLC6A9P48067 706 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 DSC2Q02487 901 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 GBX1Q14549 363 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CCDC142Q17RM4 750 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 BEAN1Q3B7T3 259 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 METTL24Q5JXM2 366 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 FAM102AQ5T9C2 384 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SLC4A10Q6U841 1118 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TTC7BQ86TV6 843 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 RSPH3Q86UC2 560 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 DGKHQ86XP1 1220 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 DRC7Q8IY82 874 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CAMKK1Q8N5S9 505 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 OR7D4Q8NG98 312 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 MYEOVQ96EZ4 313 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CYFIP2Q96F07 1278 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CDC5LQ99459 802 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ACO2Q99798 780 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 WDR11Q9BZH6 1224 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 PRDM13Q9H4Q3 707 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SYNPO2LQ9H987 977 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 AKIP1Q9NQ31 210 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TDP1Q9NUW8 608 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SIK3Q9Y2K2 1263 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 PCDHB1Q9Y5F3 818 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 IQGAP1P46940 1657 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 LRRC7Q96NW7 1537 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ATRNL1Q5VV63 1379 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 DNMT1P26358 1616 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 GOLGA3Q08378 1498 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SHANK2Q9UPX8 1470 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 LRRIQ1Q96JM4 1722 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CDC42BPBQ9Y5S2 1711 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ADGBQ8N7X0 1667 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 KIDINS220Q9ULH0 1771 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TMEM200CA6NKL6 621 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 H3BML4 177 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TRIM24O15164 1050 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 RECQL4O94761 1208 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 PRSS23O95084 383 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 NDUFA10O95299 355 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 KRT18P05783 430 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ELANEP08246 267 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 MYBP10242 640 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 LAG3P18627 525 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 PTPN7P35236 360 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ZEB1P37275 1124 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CLK3P49761 638 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CDC42EP1Q00587 391 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 GRM3Q14832 879 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 BMT2Q1RMZ1 405 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TIGD2Q4W5G0 525 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 THEMIS2Q5TEJ8 643 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 KCNV1Q6PIU1 500 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 Q6YL49 198 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 PDZD4Q76G19 769 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 DENND1CQ8IV53 801 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TRMT2AQ8IZ69 625 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 FAM9AQ8IZU1 332 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ZBTB34Q8NCN2 500 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 C3orf20Q8ND61 904 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 OR10H5Q8NGA6 315 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 PPP1R35Q8TAP8 253 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CCHCR1Q8TD31 782 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 NSUN6Q8TEA1 469 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 STON2Q8WXE9 905 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CLPTM1LQ96KA5 538 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 FAM193BQ96PV7 902 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SENP6Q9GZR1 1112 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SERHL2Q9H4I8 314 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 LDAHQ9H6V9 325 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 KMT5AQ9NQR1 393 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 LANCL2Q9NS86 450 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 DDX20Q9UHI6 824 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 PACSIN3Q9UKS6 424 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 HDAC5Q9UQL6 1122 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 LRP6O75581 1613 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ZNF518AQ6AHZ1 1483 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 KAT6AQ92794 2004 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 FRMPD2Q68DX3 1309 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 COL11A2P13942 1736 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 PLEKHD1A6NEE1 506 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 DRGXA6NNA5 263 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 MARCH11A6NNE9 402 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 PRR5-ARHGAP8B1AHC4 643 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 SLC16A6O15403 523 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 TUSC2O75896 110 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 UBXN7O94888 489 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 FTLP02792 175 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 AMY1AP04745 511 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 ALDH2P05091 517 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 MYL1P05976 194 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 IL2RBP14784 551 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 FPR1P21462 350 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 PLA2G5P39877 138 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 PTH2RP49190 550 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 MAP2K6P52564 334 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CHN2P52757 468 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 SCAPQ12770 1279 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms