RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 DNAJC25Q9H1X3 360 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 SPATA6Q9NWH7 488 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-215ENST00000554656 CLIC4Q9Y696 253 aa11.49□□□□□ -0.57
SHMT2-215ENST00000554656 A0A0B4J269 797 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 TISP43B9A030 160 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 SPTLC1O15269 473 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 OGTO15294 1046 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 CUTAO60888 179 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 MICAL2O94851 1124 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 CPB1P15086 417 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 PLCG1P19174 1290 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 VIPR2P41587 438 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 MATR3P43243 847 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 ID4P47928 161 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 ME1P48163 572 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 YWHAHQ04917 246 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 DHX8Q14562 1220 aaKnown RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 KARSQ15046 597 aaKnown RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 CCDC183Q5T5S1 534 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 CAVIN1Q6NZI2 390 aaKnown RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 ZC3H14Q6PJT7 736 aaKnown RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 PDZD4Q76G19 769 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 MAP4K3Q8IVH8 894 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 KIAA2013Q8IYS2 634 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 DCLK2Q8N568 766 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 KCTD17Q8N5Z5 321 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 APPL2Q8NEU8 664 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 NELL1Q92832 810 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 DNASE1L2Q92874 299 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 RMDN1Q96DB5 314 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 CDK5RAP3Q96JB5 506 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 PGLYRP2Q96PD5 576 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 ZFP14Q9HCL3 533 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 PRMT8Q9NR22 394 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 TMEM63CQ9P1W3 806 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 LARSQ9P2J5 1176 aaKnown RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 FBXO4Q9UKT5 387 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 ODF2LQ9ULJ1 636 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 TBX20Q9UMR3 447 aa11.48□□□□□ -0.57
SHMT2-215ENST00000554656 UBQLN1Q9UMX0 589 aaKnown RBP11.48□□□□□ -0.57
SHMT2-215ENST00000554656 FAM237AA0A1B0GTK4 181 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 ANKRD63C9JTQ0 380 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 K7ENM7 598 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 ARNTLO00327 626 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF197O14709 1029 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 HNRNPDLO14979 420 aaKnown RBP11.47□□□□□ -0.57
SHMT2-215ENST00000554656 LAMTOR5O43504 91 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 SOAT2O75908 522 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 NFICP08651 508 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 MYL4P12829 197 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 TDGF1P13385 188 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 CYP3A5P20815 502 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 NMT1P30419 496 aaKnown RBP11.47□□□□□ -0.57
SHMT2-215ENST00000554656 RPS9P46781 194 aaKnown RBP11.47□□□□□ -0.57
SHMT2-215ENST00000554656 LIG4P49917 911 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 CEBPZQ03701 1054 aaKnown RBP11.47□□□□□ -0.57
SHMT2-215ENST00000554656 CSTF1Q05048 431 aaKnown RBP11.47□□□□□ -0.57
SHMT2-215ENST00000554656 PPP2R3AQ06190 1150 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 TEAD2Q15562 447 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF528Q3MIS6 628 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 WDR44Q5JSH3 913 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 STXBP5Q5T5C0 1151 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 SPATA1Q5VX52 437 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 JADE1Q6IE81 842 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 TSSK4Q6SA08 328 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 CCDC73Q6ZRK6 1079 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 RAD54LQ92698 747 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 AK8Q96MA6 479 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 MKNK1Q9BUB5 465 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 BRD9Q9H8M2 597 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 TRPV4Q9HBA0 871 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF334Q9HCZ1 680 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-215ENST00000554656 ASAH2Q9NR71 780 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 CPSF3Q9UKF6 684 aaKnown RBP11.47□□□□□ -0.57
SHMT2-215ENST00000554656 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 PCDHA7Q9UN72 937 aa11.47□□□□□ -0.57
SHMT2-215ENST00000554656 MTMR11A4FU01 709 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 H0YCG3 227 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 SLC26A4O43511 780 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 LILRB5O75023 590 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 FAM13AO94988 1023 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 CMA1P23946 247 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 MARCKSP29966 332 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-215ENST00000554656 GDI1P31150 447 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 MAGEA9P43362 315 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 CDR1P51861 262 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 LILRA4P59901 499 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 DUSP4Q13115 394 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 MTAPQ13126 283 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ZSCAN23Q3MJ62 389 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ZC2HC1CQ53FD0 456 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-215ENST00000554656 CYP4A22Q5TCH4 519 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 OVOS1Q6IE37 1185 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF852Q6ZMS4 543 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 USP49Q70CQ1 688 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ELMOD1Q8N336 334 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 MYCT1Q8N699 235 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms