RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 E9PMD0 336 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 GPR25O00155 361 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 DIAPH2O60879 1101 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 UBOX5O94941 541 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 NTSR2O95665 410 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FGFR1OPO95684 399 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 UCHL3P15374 230 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ABCB4P21439 1286 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FGFR4P22455 802 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PMLP29590 882 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SLC8A1P32418 973 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CCNFP41002 786 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ALDH5A1P51649 535 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PLTPP55058 493 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PCBP4P57723 403 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 INHBEP58166 350 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 NFKB2Q00653 900 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SATB1Q01826 763 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 POU5F1Q01860 360 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ADAM9Q13443 819 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SLC29A2Q14542 456 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CAVIN4Q5BKX8 364 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 DCAF17Q5H9S7 520 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ZC3H12BQ5HYM0 836 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FAM26FQ5R3K3 315 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 C12orf60Q5U649 245 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 DPY19L2P1Q6NXN4 242 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 INTS5Q6P9B9 1019 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 BZW1Q7L1Q6 419 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 TRPM8Q7Z2W7 1104 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PIGWQ7Z7B1 504 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 NT5DC3Q86UY8 548 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ERICH1Q86X53 443 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CLEC10AQ8IUN9 316 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 KSR1Q8IVT5 923 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 EXOC8Q8IYI6 725 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FBXO25Q8TCJ0 367 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 MAGEC3Q8TD91 643 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 U2AF1L4Q8WU68 220 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 TGFBRAP1Q8WUH2 860 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SCFD1Q8WVM8 642 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 LMBR1Q8WVP7 490 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SYN2Q92777 582 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ACSF2Q96CM8 615 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 C18orf8Q96DM3 657 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 IQCDQ96DY2 449 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SPDL1Q96EA4 605 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SLC39A13Q96H72 371 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PBKQ96KB5 322 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FMO2Q99518 471 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FAM167BQ9BTA0 163 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 TXLNGYQ9BZA5 131 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SEMA4AQ9H3S1 761 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 TMOD4Q9NZQ9 345 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ARPP21Q9UBL0 812 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PHF24Q9UPV7 400 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 STK38LQ9Y2H1 464 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 STXBP5LQ9Y2K9 1186 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 C15orf41Q9Y2V0 281 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 UTP11Q9Y3A2 253 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 MRPS23Q9Y3D9 190 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PCNTO95613 3336 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 A0A1B0GUA9 196 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SRRM3A6NNA2 597 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ANKRD63C9JTQ0 380 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 H3BRJ5 948 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 IGF2BP3O00425 579 aaKnown RBP eCLIP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 DDX3XO00571 662 aaKnown RBP eCLIP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PLD2O14939 933 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PPFIA2O75334 1257 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 GFPT2O94808 682 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CAMTA2O94983 1202 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 KRT16P08779 473 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PCP11498 1178 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 NR2F2P24468 414 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PON1P27169 355 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 GCKP35557 465 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 IL6STP40189 918 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PPP1R2P41236 205 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 GRIA2P42262 883 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CASP4P49662 377 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PMS2P54278 862 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 NCALDP61601 193 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 RNASELQ05823 741 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 KLRC3Q07444 240 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 MCL1Q07820 350 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ADCY1Q08828 1119 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FNDC3BQ53EP0 1204 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 HERC4Q5GLZ8 1057 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 TCERG1LQ5VWI1 586 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SPTY2D1Q68D10 685 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ZDHHC24Q6UX98 284 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SEPT14Q6ZU15 432 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 DGKHQ86XP1 1220 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CPNE8Q86YQ8 564 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC50Q8IVM0 306 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 MAPKAPK5Q8IW41 473 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM192Q8IY95 271 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 C3orf20Q8ND61 904 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SLC17A8Q8NDX2 589 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms