RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 POSTNQ15063 836 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 TANGO2Q6ICL3 276 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 IQCEQ6IPM2 695 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PDZD4Q76G19 769 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ELMOD1Q8N336 334 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ZNF512Q96ME7 567 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 TMEM209Q96SK2 561 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 OXCT2Q9BYC2 517 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 EXOC7Q9UPT5 735 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SLC27A5Q9Y2P5 690 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 YIPF1Q9Y548 306 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PCDHB13Q9Y5F0 798 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FANCMQ8IYD8 2048 aa12.87□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ZNF197O14709 1029 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 MOSPD3O75425 235 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ECI2O75521 394 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PRPF6O94906 941 aaKnown RBP12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 DCNP07585 359 aaKnown RBP12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 MYL4P12829 197 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 GJA1P17302 382 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CDR1P51861 262 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 POU5F1Q01860 360 aaKnown RBP12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 MYBPC2Q14324 1141 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 E2F4Q16254 413 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SLC44A4Q53GD3 710 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FAM78AQ5JUQ0 283 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CYP4A22Q5TCH4 519 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PHLDB3Q6NSJ2 640 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 HSCBQ8IWL3 235 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SYCP3Q8IZU3 236 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ATAD1Q8NBU5 361 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 OR10T2Q8NGX3 314 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ZSWIM3Q96MP5 696 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SIT1Q9Y3P8 196 aa12.86□□□□□ -0.35
TRAPPC6B-204ENST00000554018 MTMR11A4FU01 709 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 GOLGA8IPA6NC78 632 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 GOLGA8JA6NMD2 632 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CYB561D2O14569 222 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 GFRA3O60609 400 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PPP6R2O75170 966 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 LRRN2O75325 713 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SOAT2O75908 522 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 MICAL2O94851 1124 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 IL18RAPO95256 599 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CYP11A1P05108 521 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PAX3P23760 479 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FCARP24071 287 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 TAF6P49848 677 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 EPHA5P54756 1037 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 STARD6P59095 220 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ALCAMQ13740 583 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ANGPT1Q15389 498 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 MLF2Q15773 248 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ARMCX5Q6P1M9 558 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CCDC65Q8IXS2 484 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 TTC9BQ8N6N2 239 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 GLIS3Q8NEA6 775 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 NOC3LQ8WTT2 800 aaKnown RBP12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ELSPBP1Q96BH3 223 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 DHX58Q96C10 678 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SHDQ96IW2 340 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 FAM84AQ96KN4 292 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CBWD1Q9BRT8 395 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 DNAJC25Q9H1X3 360 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PCIF1Q9H4Z3 704 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ASAH2Q9NR71 780 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 KBTBD4Q9NVX7 518 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PATJQ8NI35 1801 aa12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 KIF26AQ9ULI4 1882 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC6B-204ENST00000554018 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PROB1E7EW31 1015 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 CUTAO60888 179 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 YEATS4O95619 227 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 GLULP15104 373 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 GARTP22102 1010 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 NBL1P41271 181 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 VIPR2P41587 438 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 EPHB3P54753 998 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms