RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 BEND2Q8NDZ0 799 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 POC1BQ8TC44 478 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 JPH3Q8WXH2 748 aaPredicted RBP4.27□□□□□ -1.73
VRK1-202ENST00000553683 CAVIN3Q969G5 261 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 MTFMTQ96DP5 389 aaKnown RBP4.27□□□□□ -1.73
VRK1-202ENST00000553683 PUS7Q96PZ0 661 aaKnown RBP4.27□□□□□ -1.73
VRK1-202ENST00000553683 SMOQ99835 787 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 CNPPD1Q9BV87 410 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 LMBRD1Q9NUN5 540 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 PNPOQ9NVS9 261 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 ABCF2Q9UG63 623 aa4.27□□□□□ -1.73
VRK1-202ENST00000553683 TESQ9UGI8 421 aaKnown RBP4.27□□□□□ -1.73
VRK1-202ENST00000553683 TRGV11A0A075B6L2 103 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 A0A088AWK7 358 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 CCDC151A5D8V7 595 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 PRSS29PA6NIE9 313 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 MATN4O95460 622 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 GNAI2P04899 355 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 TYRP1P17643 537 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 PLEKHG6Q3KR16 790 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 ODR4Q5SWX8 454 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 NXNQ6DKJ4 435 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 Q6ZNX1 250 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 CATIPQ7Z7H3 387 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 PDPRQ8NCN5 879 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 SLC17A8Q8NDX2 589 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 TMIEQ8NEW7 156 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 BRIX1Q8TDN6 353 aaKnown RBP4.26□□□□□ -1.73
VRK1-202ENST00000553683 PTCD3Q96EY7 689 aaKnown RBP4.26□□□□□ -1.73
VRK1-202ENST00000553683 Q96MF0 132 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 OSBPL9Q96SU4 736 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 TLR10Q9BXR5 811 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 IMPG2Q9BZV3 1241 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 KCTD5Q9NXV2 234 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 C11orf21Q9P2W6 132 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 STXBP5LQ9Y2K9 1186 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 PCDHA3Q9Y5H8 950 aa4.26□□□□□ -1.73
VRK1-202ENST00000553683 MPPED1O15442 326 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 SUN1O94901 812 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 ZFPL1O95159 310 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 LPOP22079 712 aaPredicted RBP4.25□□□□□ -1.73
VRK1-202ENST00000553683 FOLR3P41439 243 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 FPGSQ05932 587 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 FOXI1Q12951 378 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 NFE2Q16621 373 aaPredicted RBP4.25□□□□□ -1.73
VRK1-202ENST00000553683 GEN1Q17RS7 908 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 PRR16Q569H4 304 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 IFIT1BQ5T764 474 aaKnown RBP4.25□□□□□ -1.73
VRK1-202ENST00000553683 VWA1Q6PCB0 445 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 OLFML1Q6UWY5 402 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 B3GNT9Q6UX72 402 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 PPP1R32Q7Z5V6 425 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 PRIMA1Q86XR5 153 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 SLC35G2Q8TBE7 412 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 DIS3LQ8TF46 1054 aaKnown RBP4.25□□□□□ -1.73
VRK1-202ENST00000553683 PGBD1Q96JS3 809 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 TRIB1Q96RU8 372 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 NELL2Q99435 816 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 RTFDC1Q9BY42 306 aaPredicted RBP4.25□□□□□ -1.73
VRK1-202ENST00000553683 CASS4Q9NQ75 786 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 ETAA1Q9NY74 926 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 ZIM2Q9NZV7 527 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 CDYLQ9Y232 598 aa4.25□□□□□ -1.73
VRK1-202ENST00000553683 LRRC14BA6NHZ5 514 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 E9PLN8 166 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 POLRMTO00411 1230 aaKnown RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 S100BP04271 92 aaPredicted RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 THP07101 528 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 NXPH1P58417 271 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 GPSM2P81274 684 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 ITIH3Q06033 890 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 FSTL1Q12841 308 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 PLS1Q14651 629 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 ZNF169Q14929 603 aaPredicted RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 PTPRRQ15256 657 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 FAM102BQ5T8I3 360 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 TAPT1Q6NXT6 567 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 DENND1CQ8IV53 801 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 KLHDC4Q8TBB5 520 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 CAGE1Q8TC20 777 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 SSH3Q8TE77 659 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 SNX19Q92543 992 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 SLC35A4Q96G79 324 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 PDLIM2Q96JY6 352 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 VKORC1Q9BQB6 163 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 HEPHQ9BQS7 1158 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 AIFM2Q9BRQ8 373 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 ALG13Q9NP73 1137 aaKnown RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 SARS2Q9NP81 518 aaKnown RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 SLC45A2Q9UMX9 530 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 THRAP3Q9Y2W1 955 aaKnown RBP4.24□□□□□ -1.73
VRK1-202ENST00000553683 PAXBP1Q9Y5B6 917 aa4.24□□□□□ -1.73
VRK1-202ENST00000553683 ZAR1LA6NP61 321 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 ZNF785A8K8V0 405 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 H3BUI4 141 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 ERC2O15083 957 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 TRIAP1O43715 76 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms