RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 NRP1O14786 923 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 STAU1O95793 577 aaKnown RBP10.45□□□□□ -0.74
CHD8-204ENST00000553622 ITGB1P05556 798 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 DEKP35659 375 aaKnown RBP10.45□□□□□ -0.74
CHD8-204ENST00000553622 SOX5P35711 763 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 GCNT1Q02742 428 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 ORC1Q13415 861 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 TIGD5Q53EQ6 642 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 ZNF394Q53GI3 561 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 TMEM270Q6UE05 265 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 ADGRF2Q8IZF7 708 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 FIBCD1Q8N539 461 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 OR8K1Q8NGG5 319 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 OR6B3Q8NGW1 331 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 PHOSPHO2Q8TCD6 241 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 BAP1Q92560 729 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 ZNF689Q96CS4 500 aaPredicted RBP10.45□□□□□ -0.74
CHD8-204ENST00000553622 SENP8Q96LD8 212 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 ZNF558Q96NG5 402 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 PPP1R9BQ96SB3 815 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 TMEM175Q9BSA9 504 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 NAA15Q9BXJ9 866 aaKnown RBP10.45□□□□□ -0.74
CHD8-204ENST00000553622 SDCBP2Q9H190 292 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 SNX25Q9H3E2 840 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 CWH43Q9H720 699 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 VRTNQ9H8Y1 702 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 CISHQ9NSE2 258 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 ABHD10Q9NUJ1 306 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 FBXL5Q9UKA1 691 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 DAAM1Q9Y4D1 1078 aa10.45□□□□□ -0.74
CHD8-204ENST00000553622 TIMM13Q9Y5L4 95 aaPredicted RBP10.45□□□□□ -0.74
CHD8-204ENST00000553622 GRXCR1A8MXD5 290 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 CYP26A1O43174 497 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 TRAPPC3O43617 180 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 NRDCO43847 1150 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 GALTP07902 379 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 ODC1P11926 461 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 SKILP12757 684 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 FERP16591 822 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 LAG3P18627 525 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 JAM2P57087 298 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 SOWAHAQ2M3V2 549 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 TDRD12Q587J7 1177 aaKnown RBP10.44□□□□□ -0.74
CHD8-204ENST00000553622 WSCD1Q658N2 575 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 KCNT2Q6UVM3 1135 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 DPH6Q7L8W6 267 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 METTL23Q86XA0 190 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 CEP57Q86XR8 500 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 PDCL2Q8N4E4 241 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 TC2NQ8N9U0 490 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 COLGALT1Q8NBJ5 622 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 RBBP8NLQ8NC74 664 aaPredicted RBP10.44□□□□□ -0.74
CHD8-204ENST00000553622 SHC3Q92529 594 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 RAD9AQ99638 391 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 MRPL45Q9BRJ2 306 aaKnown RBP10.44□□□□□ -0.74
CHD8-204ENST00000553622 BCO2Q9BYV7 579 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 NUCKS1Q9H1E3 243 aaKnown RBP10.44□□□□□ -0.74
CHD8-204ENST00000553622 CYP3A43Q9HB55 503 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 AAASQ9NRG9 546 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 GDAP2Q9NXN4 497 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 ADAM28Q9UKQ2 775 aa10.44□□□□□ -0.74
CHD8-204ENST00000553622 PTPRDP23468 1912 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 SF3B1O75533 1304 aaKnown RBP eCLIP10.43□□□□□ -0.74
CHD8-204ENST00000553622 ARHGEF37A1IGU5 675 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 LCHNA4D1U4 455 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 CALCAP01258 141 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 PDGFRBP09619 1106 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 CCDC172P0C7W6 258 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 MYOGP15173 224 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 CD19P15391 556 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 GNL1P36915 607 aaPredicted RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 NDST1P52848 882 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 HTRA4P83105 476 aaPredicted RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 KLHL30Q0D2K2 578 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 FAM171A1Q5VUB5 890 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 E4F1Q66K89 784 aaPredicted RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 FAM109BQ6ICB4 259 aaPredicted RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 FMNL3Q8IVF7 1028 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 TOP6BLQ8N6T0 577 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 JAKMIP2Q96AA8 810 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 TRIM44Q96DX7 344 aaPredicted RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 TMEM169Q96HH4 297 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 SUSD3Q96L08 255 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 ZNF830Q96NB3 372 aaPredicted RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 PANX2Q96RD6 677 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 DNAJC7Q99615 494 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 BAG1Q99933 345 aaPredicted RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 GPR88Q9GZN0 384 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 DNAI2Q9GZS0 605 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 DEF6Q9H4E7 631 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 RC3H2Q9HBD1 1191 aaKnown RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 SEPT11Q9NVA2 429 aaKnown RBP10.43□□□□□ -0.74
CHD8-204ENST00000553622 MARCH5Q9NX47 278 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 HMGXB4Q9UGU5 601 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 MYO6Q9UM54 1294 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 L1RE1Q9UN81 338 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 PCDHB12Q9Y5F1 795 aa10.43□□□□□ -0.74
CHD8-204ENST00000553622 FAM170AA1A519 330 aa10.42□□□□□ -0.74
CHD8-204ENST00000553622 A8MXQ7 604 aa10.42□□□□□ -0.74
CHD8-204ENST00000553622 TMEM189-UBE2V1I3L0A0 370 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms