RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MAGEA1P43355 309 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 PDE6CP51160 858 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 LILRA4P59901 499 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 SV2CQ496J9 727 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 CNKSR3Q6P9H4 555 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 GLB1LQ6UWU2 654 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 GLYCTKQ8IVS8 523 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 RPUSD2Q8IZ73 545 aaKnown RBP14.7□□□□□ -0.06
APEX1-205ENST00000553555 CRIPAKQ8N1N5 446 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 DDX1Q92499 740 aaKnown RBP14.7□□□□□ -0.06
APEX1-205ENST00000553555 MMS19Q96T76 1030 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 PRDM5Q9NQX1 630 aaPredicted RBP14.7□□□□□ -0.06
APEX1-205ENST00000553555 GDAP2Q9NXN4 497 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 NAGPAQ9UK23 515 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 PCDHB7Q9Y5E2 793 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 SNX9Q9Y5X1 595 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 A0A0U1RQJ8 604 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 GOLGA6L9A6NEM1 432 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 KPNA7A9QM74 516 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 CALCAP01258 141 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 FGFR1P11362 822 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 NOMO2Q5JPE7 1267 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 ALKBH5Q6P6C2 394 aaKnown RBP14.69□□□□□ -0.06
APEX1-205ENST00000553555 ZNF662Q6ZS27 426 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 ZNF677Q86XU0 584 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 TTC39CQ8N584 583 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 ATRIPQ8WXE1 791 aa14.69□□□□□ -0.06
APEX1-205ENST00000553555 PODXLO00592 558 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 CILPO75339 1184 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 MMEP08473 750 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 RAG1P15918 1043 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 GNA15P30679 374 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 CLCNKBP51801 687 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 VAV2P52735 878 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 FMO1Q01740 532 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 CDR2Q01850 454 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 INCA1Q0VD86 236 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 TUSC3Q13454 348 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 IKBKEQ14164 716 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 UPP1Q16831 310 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 CCDC122Q5T0U0 273 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 TAF3Q5VWG9 929 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 MFSD5Q6N075 450 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 LIMS2Q7Z4I7 341 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 KIAA1328Q86T90 577 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 URGCPQ8TCY9 931 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 WHAMMQ8TF30 809 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 DDX27Q96GQ7 796 aaKnown RBP14.68□□□□□ -0.06
APEX1-205ENST00000553555 UROC1Q96N76 676 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 RNF216Q9NWF9 866 aaPredicted RBP14.68□□□□□ -0.06
APEX1-205ENST00000553555 KANSL3Q9P2N6 904 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 CACNG4Q9UBN1 327 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 LRFN2Q9ULH4 789 aa14.68□□□□□ -0.06
APEX1-205ENST00000553555 BARX2Q9UMQ3 279 aaPredicted RBP14.68□□□□□ -0.06
APEX1-205ENST00000553555 RCCD1A6NED2 376 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 CASTOR2A6NHX0 329 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 PJA2O43164 708 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 IGFBP6P24592 240 aaPredicted RBP14.67□□□□□ -0.06
APEX1-205ENST00000553555 ARHGAP25P42331 645 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 RAD23BP54727 409 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 SOWAHAQ2M3V2 549 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 ZNF394Q53GI3 561 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 PCDHB18PQ96TA0 734 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 PAAF1Q9BRP4 392 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 LUC7LQ9NQ29 371 aaKnown RBP14.67□□□□□ -0.06
APEX1-205ENST00000553555 SEPT11Q9NVA2 429 aaKnown RBP14.67□□□□□ -0.06
APEX1-205ENST00000553555 TFR2Q9UP52 801 aa14.67□□□□□ -0.06
APEX1-205ENST00000553555 TACC1O75410 805 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 DDHD2O94830 711 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 ABL1P00519 1130 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 PAEPP09466 180 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 FAM163BP0C2L3 166 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 CSF2RAP15509 400 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 DSC1Q08554 894 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 DPH6Q7L8W6 267 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 PALB2Q86YC2 1186 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 ZNF280BQ86YH2 543 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 NPAS4Q8IUM7 802 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 TMEM199Q8N511 208 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 SLC4A11Q8NBS3 891 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 ZNF606Q8WXB4 792 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 CASD1Q96PB1 797 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 TWNKQ96RR1 684 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 MRPL45Q9BRJ2 306 aaKnown RBP14.66□□□□□ -0.06
APEX1-205ENST00000553555 ELOVL4Q9GZR5 314 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 LACRTQ9GZZ8 138 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 LZTFL1Q9NQ48 299 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 TBC1D13Q9NVG8 400 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 HOXA2O43364 376 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 THAP12O43422 761 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 HUS1O60921 280 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 GZMAP12544 262 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 NDST1P52848 882 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 PTPN14Q15678 1187 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 ARHGAP29Q52LW3 1261 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 DCLRE1AQ6PJP8 1040 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 CD300LGQ6UXG3 332 aa14.66□□□□□ -0.06
APEX1-205ENST00000553555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.66□□□□□ -0.06
APEX1-205ENST00000553555 NYAP1Q6ZVC0 841 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms