RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CLIC2O15247 247 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 TGFB1I1O43294 461 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 LRRN2O75325 713 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 ITGB3P05106 788 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 ELF1P32519 619 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 GPC5P78333 572 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 EHHADHQ08426 723 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 UVSSAQ2YD98 709 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 ARMCX5Q6P1M9 558 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 EPM2AIP1Q7L775 607 aaPredicted RBP19.71■□□□□ 0.75
SHMT2-206ENST00000553529 LRRTM3Q86VH5 581 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 OR5B17Q8NGF7 314 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 KCNG4Q8TDN1 519 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 C7orf25Q9BPX7 421 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 MTMR12Q9C0I1 747 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 ASB7Q9H672 318 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 SLC39A2Q9NP94 309 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 TMLHEQ9NVH6 421 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.71■□□□□ 0.75
SHMT2-206ENST00000553529 IGSF9Q9P2J2 1179 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 AFF4Q9UHB7 1163 aaKnown RBP19.71■□□□□ 0.75
SHMT2-206ENST00000553529 SIX4Q9UIU6 781 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 RCOR1Q9UKL0 485 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 FBXL21Q9UKT6 434 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 MRPS23Q9Y3D9 190 aaKnown RBP19.71■□□□□ 0.75
SHMT2-206ENST00000553529 C2CD2Q9Y426 696 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 PCDHB13Q9Y5F0 798 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 MUC6Q6W4X9 2439 aa19.71■□□□□ 0.75
SHMT2-206ENST00000553529 H0Y858 1186 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 CYB561D2O14569 222 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 ACTN4O43707 911 aaKnown RBP19.7■□□□□ 0.74
SHMT2-206ENST00000553529 PRR29P0C7W0 189 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 SCP2P22307 547 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 STXBP5Q5T5C0 1151 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 USP37Q86T82 979 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 ALYREFQ86V81 257 aaKnown RBP19.7■□□□□ 0.74
SHMT2-206ENST00000553529 CD302Q8IX05 232 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 IQUBQ8NA54 791 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 RDH13Q8NBN7 331 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 LEO1Q8WVC0 666 aaPredicted RBP19.7■□□□□ 0.74
SHMT2-206ENST00000553529 SCFD1Q8WVM8 642 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 ELMO3Q96BJ8 720 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 LPIN3Q9BQK8 851 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 MFSD1Q9H3U5 465 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 ZNF334Q9HCZ1 680 aaPredicted RBP19.7■□□□□ 0.74
SHMT2-206ENST00000553529 EXOC7Q9UPT5 735 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 DERAQ9Y315 318 aa19.7■□□□□ 0.74
SHMT2-206ENST00000553529 ZDBF2Q9HCK1 2354 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 XPOTO43592 962 aaKnown RBP19.69■□□□□ 0.74
SHMT2-206ENST00000553529 KLRC4O43908 158 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 EXTL3O43909 919 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 ODC1P11926 461 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 MYL4P12829 197 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 PFKFB1P16118 471 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 GARTP22102 1010 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 FCARP24071 287 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 SLC39A12Q504Y0 691 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 FAM26FQ5R3K3 315 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 TANGO2Q6ICL3 276 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 OSTM1Q86WC4 334 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 KCNH3Q9ULD8 1083 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 AGAP1Q9UPQ3 857 aa19.69■□□□□ 0.74
SHMT2-206ENST00000553529 POU2F2P09086 479 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 SRFP11831 508 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 PTPN2P17706 415 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 TYMPP19971 482 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 ACAT1P24752 427 aaKnown RBP19.68■□□□□ 0.74
SHMT2-206ENST00000553529 GPR15P49685 360 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 TAF6P49848 677 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 GRM2Q14416 872 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 POSTNQ15063 836 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 TEAD2Q15562 447 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 TPGS2Q68CL5 300 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 CENPPQ6IPU0 288 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 TMC8Q8IU68 726 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 GPD1LQ8N335 351 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 PAGE5Q96GU1 130 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 LRRC3Q9BY71 257 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 FOXQ1Q9C009 403 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
SHMT2-206ENST00000553529 GOLPH3LQ9H4A5 285 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 HSPBP1Q9NZL4 362 aa19.68■□□□□ 0.74
SHMT2-206ENST00000553529 IL18RAPO95256 599 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 ATF6P18850 670 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 CYP2J2P51589 502 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 BFSP1Q12934 665 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 GPR17Q13304 367 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 FAM78AQ5JUQ0 283 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 SDHAF4Q5VUM1 108 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 ASTLQ6HA08 431 aaPredicted RBP19.67■□□□□ 0.74
SHMT2-206ENST00000553529 UNC13DQ70J99 1090 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 CSGALNACT2Q8N6G5 542 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 SHKBP1Q8TBC3 707 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 RSPRY1Q96DX4 576 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 CUEDC2Q9H467 287 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 AGPAT3Q9NRZ7 376 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 L1RE1Q9UN81 338 aa19.67■□□□□ 0.74
SHMT2-206ENST00000553529 KPNA7A9QM74 516 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 CYP11A1P05108 521 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 KRT19P08727 400 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms