RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 IRF9Q00978 393 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 CRHR2Q13324 411 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 MTMR1Q13613 665 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 RTP5Q14D33 572 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 ATP13A4Q4VNC1 1196 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 FIGNQ5HY92 759 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 FAM47AQ5JRC9 791 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 CPZQ66K79 652 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 KCTD1Q719H9 257 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 NECAB2Q7Z6G3 386 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 FRMD5Q7Z6J6 570 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 STK32CQ86UX6 486 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 ZNF761Q86XN6 746 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-220ENST00000553491 PROSER1Q86XN7 944 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 SPATS2Q86XZ4 545 aaKnown RBP5.49□□□□□ -1.53
ATXN3-220ENST00000553491 ZDHHC14Q8IZN3 488 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 FAM43AQ8N2R8 423 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 PHOSPHO1Q8TCT1 267 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 SMCR8Q8TEV9 937 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-220ENST00000553491 RUFY2Q8WXA3 655 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 CLEC4DQ8WXI8 215 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 ZNF287Q9HBT7 754 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 PCDH18Q9HCL0 1135 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 DTLQ9NZJ0 730 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 KLHL42Q9P2K6 505 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 ZBTB21Q9ULJ3 1066 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 AFG3L2Q9Y4W6 797 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 PCDHB4Q9Y5E5 795 aa5.49□□□□□ -1.53
ATXN3-220ENST00000553491 RPAP1Q9BWH6 1393 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-220ENST00000553491 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 PLXNB2O15031 1838 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 PARP14Q460N5 1801 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 CEP350Q5VT06 3117 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 MCM3APO60318 1980 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ATRNL1Q5VV63 1379 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 C19orf81C9J6K1 198 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 SCDO00767 359 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ZNF213O14771 459 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 FOXD2O60548 495 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 CLASP2O75122 1294 aaKnown RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TSPY3P0CV98 308 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TSPY8P0CW00 308 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 AKR1B1P15121 316 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 SLC9A1P19634 815 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 RPL13P26373 211 aaKnown RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 SHMT1P34896 483 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 SARSP49591 514 aaKnown RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 IRX3P78415 501 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TFAP4Q01664 338 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 OCRLQ01968 901 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 SP3Q02447 781 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 PPARAQ07869 468 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TUSC3Q13454 348 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ARHGEF6Q15052 776 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TREML2Q5T2D2 321 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ZFYVE27Q5T4F4 411 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 VPS53Q5VIR6 699 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 WDR78Q5VTH9 848 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TATDN1Q6P1N9 297 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TEPPQ6URK8 271 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 NLGN4XQ8N0W4 816 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 EFHBQ8N7U6 833 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 CXorf38Q8TB03 319 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 CD99L2Q8TCZ2 262 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ACER1Q8TDN7 264 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 DLG3Q92796 817 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 RELTQ969Z4 430 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 TOE1Q96GM8 510 aaKnown RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 PAGR1Q9BTK6 254 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ADAM7Q9H2U9 754 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 NGRNQ9NPE2 291 aaKnown RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 SAGE1Q9NXZ1 904 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 NTMQ9P121 344 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ARPP21Q9UBL0 812 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 CLIP2Q9UDT6 1046 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-220ENST00000553491 B3GALT1Q9Y5Z6 326 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 ATP23Q9Y6H3 246 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 THSD7BQ9C0I4 1608 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 CCDC171Q6TFL3 1326 aa5.48□□□□□ -1.53
ATXN3-220ENST00000553491 LOC285556D6RIA3 1793 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 TSPY2A6NKD2 308 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 FAM90A27PA6NNH2 459 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 PRICKLE3O43900 615 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 MAFKO60675 156 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 PRKD3O94806 890 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 FGAP02671 866 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 HSPD1P10809 573 aaKnown RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 EEF2P13639 858 aaKnown RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 BACE1P56817 501 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 IKQ13123 557 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 PLS1Q14651 629 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 SBK1Q52WX2 424 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 NT5DC1Q5TFE4 455 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 CASC1Q6TDU7 716 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 MFSD6Q6ZSS7 791 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 EP400NLQ6ZTU2 488 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 TMEM179Q6ZVK1 233 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms