RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PANK1Q8TE04 598 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 CCDC51Q96ER9 411 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 ZSWIM3Q96MP5 696 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 MAP3K14Q99558 947 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 ZNF577Q9BSK1 485 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 GTPBP2Q9BX10 602 aaKnown RBP5.74□□□□□ -1.49
CKAP4-203ENST00000553039 OSBPL3Q9H4L5 887 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 SLITRK6Q9H5Y7 841 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 PRORYQ9H606 182 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 CYLDQ9NQC7 956 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 AGPAT5Q9NUQ2 364 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 OBP2AQ9NY56 170 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 SCHIP1Q9P0W5 487 aaPredicted RBP5.74□□□□□ -1.49
CKAP4-203ENST00000553039 BACE2Q9Y5Z0 518 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 GREB1Q4ZG55 1949 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 PATJQ8NI35 1801 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 NEDD4P46934 1319 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 NBEAQ8NFP9 2946 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 ERVH48-1M5A8F1 160 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 ARNTLO00327 626 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 TRDMT1O14717 391 aaKnown RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 IFIT3O14879 490 aaKnown RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 DHX15O43143 795 aaKnown RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 ALDH1A2O94788 518 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 BRD2P25440 801 aaKnown RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 MZF1P28698 734 aaPredicted RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 HOXA11P31270 313 aaPredicted RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 SOX9P48436 509 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 SCNN1GP51170 649 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 PSMA6P60900 246 aaKnown RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 SH3BP2P78314 561 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 GRIK3Q13003 919 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 AAMPQ13685 434 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 SEC23AQ15436 765 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 XKR3Q5GH77 459 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 TMEM196Q5HYL7 178 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 SDE2Q6IQ49 451 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 TXNDC11Q6PKC3 985 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 ANKS3Q6ZW76 656 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 TCEAL8Q8IYN2 117 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 TSTD1Q8NFU3 115 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 TTC8Q8TAM2 541 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 SPATA18Q8TC71 538 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 PI4K2BQ8TCG2 481 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 ACDQ96AP0 544 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 SPZ1Q9BXG8 430 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 NIFKQ9BYG3 293 aaKnown RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 TRIM6Q9C030 488 aaPredicted RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 NIF3L1Q9GZT8 377 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 MIOSQ9NXC5 875 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 GTSE1Q9NYZ3 720 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 MBD1Q9UIS9 605 aaPredicted RBP5.73□□□□□ -1.49
CKAP4-203ENST00000553039 INVSQ9Y283 1065 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 IPPQ9Y573 584 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 C2orf16Q68DN1 1984 aa5.73□□□□□ -1.49
CKAP4-203ENST00000553039 LOXHD1Q8IVV2 1947 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 LAMA4Q16363 1823 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 ITPR1Q14643 2758 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 PIEZO2Q9H5I5 2752 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 IGKV6-21A0A0C4DH24 114 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 A6NJY4 79 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 GOLGA8CPA6NN73 597 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 WDR64B1ANS9 1081 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CCER2I3L3R5 266 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SH3BP5O60239 455 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 MAFO75444 373 aaPredicted RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 ERLIN2O94905 339 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 FGF19O95750 216 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CFIP05156 583 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SERPINF2P08697 491 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SRGAP2CP0DJJ0 459 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 MYL4P12829 197 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CD59P13987 128 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 ATF2P15336 505 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 HOXC13P31276 330 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 DNAJA1P31689 397 aaKnown RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SFNP31947 248 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 MLH1P40692 756 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 FAM193AP78312 1265 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 LSM11P83369 360 aaKnown RBP eCLIP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 RHDQ02161 417 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CYP4A11Q02928 519 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 TUSC3Q13454 348 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 DMC1Q14565 340 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 TARBP2Q15633 366 aaKnown RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 UBE2SQ16763 222 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SLC35G1Q2M3R5 365 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 LINC01559Q495D7 138 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 PREPLQ4J6C6 727 aaPredicted RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 COLEC12Q5KU26 742 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 UBXN11Q5T124 520 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 TPGS2Q68CL5 300 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 NOTUMQ6P988 496 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 GLRX5Q86SX6 157 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 ARID3BQ8IVW6 561 aaPredicted RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 TMTC2Q8N394 836 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 PNPLA1Q8N8W4 532 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 FAM181AQ8N9Y4 354 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SMG8Q8ND04 991 aaKnown RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 TCEAL4Q96EI5 215 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms