RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 NT5DC4Q86YG4 428 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.69
LETMD1-234ENST00000552645 ZNF592Q92610 1267 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 PPP2R3CQ969Q6 453 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 MFSD14AQ96MC6 490 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 CGRRF1Q99675 332 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 ZBP1Q9H171 429 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 TLE6Q9H808 572 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 NGRNQ9NPE2 291 aaKnown RBP10.71□□□□□ -0.69
LETMD1-234ENST00000552645 INTS13Q9NVM9 706 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 AGAP1Q9UPQ3 857 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 BRWD1Q9NSI6 2320 aa10.71□□□□□ -0.7
LETMD1-234ENST00000552645 TMEM189-UBE2V1I3L0A0 370 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 TRIM49P0CI25 452 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 TRIM49CP0CI26 452 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 RPL17P18621 184 aaKnown RBP10.7□□□□□ -0.7
LETMD1-234ENST00000552645 POU3F3P20264 500 aaPredicted RBP10.7□□□□□ -0.7
LETMD1-234ENST00000552645 LRPAP1P30533 357 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 NLRP12P59046 1061 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 DLG4P78352 724 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 ELAVL2Q12926 359 aaKnown RBP10.7□□□□□ -0.7
LETMD1-234ENST00000552645 BFSP1Q12934 665 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 BIRC3Q13489 604 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 NFIL3Q16649 462 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 DCAF17Q5H9S7 520 aaPredicted RBP10.7□□□□□ -0.7
LETMD1-234ENST00000552645 TCERG1LQ5VWI1 586 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 SCARA3Q6AZY7 606 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 PDE12Q6L8Q7 609 aaKnown RBP10.7□□□□□ -0.7
LETMD1-234ENST00000552645 LLGL2Q6P1M3 1020 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 PRSS55Q6UWB4 352 aaPredicted RBP10.7□□□□□ -0.7
LETMD1-234ENST00000552645 CD300LGQ6UXG3 332 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 WDR49Q8IV35 697 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 C1orf127Q8N9H9 656 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 MLKLQ8NB16 471 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 PLEKHO2Q8TD55 490 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 EXOC4Q96A65 974 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 TTPALQ9BTX7 342 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 HERC2P3Q9BVR0 1158 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 STK39Q9UEW8 545 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 ITGA11Q9UKX5 1188 aa10.7□□□□□ -0.7
LETMD1-234ENST00000552645 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.7□□□□□ -0.7
LETMD1-234ENST00000552645 C2orf71A6NGG8 1288 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 LRRIQ3A6PVS8 624 aaPredicted RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 FSCN2O14926 492 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 SKILP12757 684 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 BRD2P25440 801 aaKnown RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 TKTP29401 623 aaKnown RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 VAMP7P51809 220 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 LILRA4P59901 499 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 RBP5P82980 135 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 MAPK8IP2Q13387 824 aaPredicted RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 CCDC40Q4G0X9 1142 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 RTP2Q5QGT7 225 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 TTI2Q6NXR4 508 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 INTS8Q75QN2 995 aaKnown RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 TRAPPC11Q7Z392 1133 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 USP37Q86T82 979 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 MRPL43Q8N983 215 aaKnown RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 NEK11Q8NG66 645 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 PARD3BQ8TEW8 1205 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 ZNF560Q96MR9 790 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 DUSP9Q99956 384 aaKnown RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 EMILIN2Q9BXX0 1053 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.79e-7■■■■■ 51.2
LETMD1-234ENST00000552645 DACH1Q9UI36 760 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 TIMM13Q9Y5L4 95 aaPredicted RBP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 PLXNA3P51805 1871 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 ANO9A1A5B4 782 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 USP27XA6NNY8 438 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 PIRO00625 290 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 SPTLC1O15269 473 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 CCP110O43303 1012 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 IVLP07476 585 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 KLRC2P26717 231 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 TAF6P49848 677 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 ZNF165P49910 485 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 DSG1Q02413 1049 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 HYAL1Q12794 435 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 TRPC3Q13507 836 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 PSMD5Q16401 504 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 SV2CQ496J9 727 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 TMEM174Q8WUU8 243 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 ZNF516Q92618 1163 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 CLDND1Q9NY35 253 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 IMPACTQ9P2X3 320 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.69□□□□□ -0.7
LETMD1-234ENST00000552645 SIX4Q9UIU6 781 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 RWDD2AQ9UIY3 292 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 SSX2IPQ9Y2D8 614 aa10.69□□□□□ -0.7
LETMD1-234ENST00000552645 KPNA7A9QM74 516 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 CYB561D2O14569 222 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 LINC01565O15544 149 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 CNPP09543 421 aaKnown RBP10.68□□□□□ -0.7
LETMD1-234ENST00000552645 FGFR3P22607 806 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 PNPLA4P41247 253 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 GCLMP48507 274 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 ARPP19P56211 112 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 MYO1EQ12965 1108 aa10.68□□□□□ -0.7
LETMD1-234ENST00000552645 HSP90AA4PQ58FG1 418 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms