RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 TFR2Q9UP52 801 aa7.6□□□□□ -1.19
PFDN5-217ENST00000552548 FAN1Q9Y2M0 1017 aa7.6□□□□□ -1.19
PFDN5-217ENST00000552548 CEP290O15078 2479 aa7.6□□□□□ -1.19
PFDN5-217ENST00000552548 RALGAPA2Q2PPJ7 1873 aa7.6□□□□□ -1.19
PFDN5-217ENST00000552548 MYBPHLA2RUH7 354 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 KPNA7A9QM74 516 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 PER2O15055 1255 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 KIAA0391O15091 583 aaKnown RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 CYP26A1O43174 497 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 BEST1O76090 585 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 FGF18O76093 207 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 GFPT2O94808 682 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 CHRNB2P17787 502 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 SCP2P22307 547 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 BRD2P25440 801 aaKnown RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 CASP14P31944 242 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 BMP8BP34820 402 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 CLCN1P35523 988 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 BMPR1AP36894 532 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 AARSP49588 968 aaKnown RBP eCLIP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 ARPP19P56211 112 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 ARID5AQ03989 594 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 TBX2Q13207 712 aaPredicted RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 TRPC3Q13507 836 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 RAPGEF1Q13905 1077 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 ADGRE1Q14246 886 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 DRAP1Q14919 205 aaPredicted RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 GRIN2CQ14957 1233 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 C2CD6Q53TS8 623 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 TAF3Q5VWG9 929 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 DCLRE1AQ6PJP8 1040 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 SARM1Q6SZW1 724 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 GBP6Q6ZN66 633 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 PAQR9Q6ZVX9 377 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 LIMS2Q7Z4I7 341 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 PHLDB2Q86SQ0 1253 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 FAM114A1Q8IWE2 563 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 RNF168Q8IYW5 571 aaPredicted RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 PPM1KQ8N3J5 372 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 VN1R2Q8NFZ6 395 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 SPPL3Q8TCT6 385 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 GPR152Q8TDT2 470 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 PGLYRP2Q96PD5 576 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 FAM193BQ96PV7 902 aaPredicted RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 ERGIC2Q96RQ1 377 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 MMS19Q96T76 1030 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 PCDHB18PQ96TA0 734 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 GTPBP4Q9BZE4 634 aaKnown RBP7.59□□□□□ -1.19
PFDN5-217ENST00000552548 ITGA11Q9UKX5 1188 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 DERAQ9Y315 318 aa7.59□□□□□ -1.19
PFDN5-217ENST00000552548 VWA8A3KMH1 1905 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PLXNA4Q9HCM2 1894 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CITO14578 2027 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 LRRC53A6NM62 1247 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PIK3R2O00459 728 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 LINC01565O15544 149 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 TADA2AO75478 443 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 FGFR1OPO95684 399 aaKnown RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 ALDH2P05091 517 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 SKIP12755 728 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CCDC130P13994 396 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 UCHL3P15374 230 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 GTF2H1P32780 548 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 ABCD1P33897 745 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 USP8P40818 1118 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PGFP49763 221 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 TAF6P49848 677 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 NDST1P52848 882 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 RAD23BP54727 409 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 JAM2P57087 298 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CUL2Q13617 745 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 MTF1Q14872 753 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PLPP4Q5VZY2 271 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PDXDC1Q6P996 788 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 WDR59Q6PJI9 974 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 DSTYKQ6XUX3 929 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 DPH6Q7L8W6 267 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 ACOT1Q86TX2 421 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 NOP9Q86U38 636 aaKnown RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 SLC47A2Q86VL8 602 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CD302Q8IX05 232 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 VPS52Q8N1B4 723 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 SLC4A11Q8NBS3 891 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 ST13P5Q8NFI4 369 aaPredicted RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 LNX1Q8TBB1 728 aaPredicted RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PHOSPHO2Q8TCD6 241 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CACTINQ8WUQ7 758 aaKnown RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 RIN2Q8WYP3 895 aaPredicted RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 NDRG1Q92597 394 aaKnown RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
PFDN5-217ENST00000552548 SUSD3Q96L08 255 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 ZNF558Q96NG5 402 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PKMYT1Q99640 499 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CHP1Q99653 195 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CLSTN3Q9BQT9 956 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 BCO2Q9BYV7 579 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 PRDM12Q9H4Q4 367 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 UBN1Q9NPG3 1134 aa7.58□□□□□ -1.2
PFDN5-217ENST00000552548 CISHQ9NSE2 258 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms