RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CBWD2Q8IUF1 395 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 C12orf56Q8IXR9 622 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 C1orf127Q8N9H9 656 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 ZNF560Q96MR9 790 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 DNMT3BQ9UBC3 853 aaKnown RBP20.5■□□□□ 0.87
DDX54-208ENST00000551344 ITGA11Q9UKX5 1188 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 TECTAO75443 2155 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 ZNF202O95125 648 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 SEC24AO95486 1093 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 PTPN2P17706 415 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 RBP5P82980 135 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 TDGQ13569 410 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 RNF19BQ6ZMZ0 732 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 KRBA2Q6ZNG9 492 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 GET4Q7L5D6 327 aaPredicted RBP20.49■□□□□ 0.87
DDX54-208ENST00000551344 CSGALNACT2Q8N6G5 542 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 LRRC52Q8N7C0 313 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 XXYLT1Q8NBI6 393 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 GOLGA5Q8TBA6 731 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 ANKRD36BP1Q96IX9 119 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 MFSD14AQ96MC6 490 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 AVENQ9NQS1 362 aaPredicted RBP20.49■□□□□ 0.87
DDX54-208ENST00000551344 INTS13Q9NVM9 706 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 AGAP1Q9UPQ3 857 aa20.49■□□□□ 0.87
DDX54-208ENST00000551344 CLIC2O15247 247 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 RPN1P04843 607 aaKnown RBP20.48■□□□□ 0.87
DDX54-208ENST00000551344 ITGB3P05106 788 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 TMEM191BP0C7N4 346 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 POLR2BP30876 1174 aaKnown RBP20.48■□□□□ 0.87
DDX54-208ENST00000551344 NTHL1P78549 312 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 SNRNP35Q16560 246 aaKnown RBP20.48■□□□□ 0.87
DDX54-208ENST00000551344 DUOXA2Q1HG44 320 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 PABPC1LQ4VXU2 614 aaKnown RBP20.48■□□□□ 0.87
DDX54-208ENST00000551344 HFE2Q6ZVN8 426 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 THEM5Q8N1Q8 247 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 CXorf38Q8TB03 319 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 CCDC47Q96A33 483 aaKnown RBP20.48■□□□□ 0.87
DDX54-208ENST00000551344 PBXIP1Q96AQ6 731 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 CCDC34Q96HJ3 373 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 CDH7Q9ULB5 785 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 INSL5Q9Y5Q6 135 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 SCN1AP35498 2009 aa20.48■□□□□ 0.87
DDX54-208ENST00000551344 WDR49Q8IV35 697 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 ELMOD1Q8N336 334 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 RDH13Q8NBN7 331 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 KIAA0895Q8NCT3 520 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 TMEM174Q8WUU8 243 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 ASIC4Q96FT7 647 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 GOLPH3LQ9H4A5 285 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 HCFC1R1Q9NWW0 138 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 HSFX1Q9UBD0 423 aa20.47■□□□□ 0.87
DDX54-208ENST00000551344 R3HCC1Q9Y3T6 440 aaKnown RBP20.47■□□□□ 0.87
DDX54-208ENST00000551344 DOCK6Q96HP0 2047 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 GOLGA6L4A6NEF3 574 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 PRPF40AO75400 957 aaKnown RBP20.46■□□□□ 0.87
DDX54-208ENST00000551344 TNNC2P02585 160 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 RHOP08100 348 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 OR4Q2P0C623 313 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 CYP2J2P51589 502 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 DPYDQ12882 1025 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 WSCD1Q658N2 575 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 IQCEQ6IPM2 695 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 FGF13Q92913 245 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 ZNF512Q96ME7 567 aaPredicted RBP20.46■□□□□ 0.87
DDX54-208ENST00000551344 FNBP1Q96RU3 617 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 MTMR12Q9C0I1 747 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 GDAP2Q9NXN4 497 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 MRPS23Q9Y3D9 190 aaKnown RBP20.46■□□□□ 0.87
DDX54-208ENST00000551344 HCN4Q9Y3Q4 1203 aa20.46■□□□□ 0.87
DDX54-208ENST00000551344 ARIH1Q9Y4X5 557 aaPredicted RBP20.46■□□□□ 0.87
DDX54-208ENST00000551344 ANHXE9PGG2 379 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 PDXKO00764 312 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 RHOBTB3O94955 611 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 KIF20AO95235 890 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 KRT19P08727 400 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 CYP24A1Q07973 514 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 SMARCB1Q12824 385 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 MYO1EQ12965 1108 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 DUSP4Q13115 394 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 PLD1Q13393 1074 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 PSMD6Q15008 389 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 CENPPQ6IPU0 288 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 SLC44A3Q8N4M1 653 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 OR5B17Q8NGF7 314 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 OR10T2Q8NGX3 314 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 ITFG1Q8TB96 612 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 PGLYRP2Q96PD5 576 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 ZCWPW1Q9H0M4 648 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 SIX4Q9UIU6 781 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 TRIOO75962 3097 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 DOCK8Q8NF50 2099 aa20.45■□□□□ 0.86
DDX54-208ENST00000551344 ZNF197O14709 1029 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 EXOC3O60645 756 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 HUS1O60921 280 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 MICAL2O94851 1124 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 VNN2O95498 520 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 TNNI1P19237 187 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 TWF1Q12792 350 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 KCNB1Q14721 858 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms