RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 GLE1Q53GS7 698 aaKnown RBP12.84□□□□□ -0.35
NR4A1-215ENST00000550557 OVOS1Q6IE37 1185 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 ADGRF2Q8IZF7 708 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 PABPC5Q96DU9 382 aaKnown RBP12.84□□□□□ -0.35
NR4A1-215ENST00000550557 FTHL17Q9BXU8 183 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 THG1LQ9NWX6 298 aaKnown RBP12.84□□□□□ -0.35
NR4A1-215ENST00000550557 PSD3Q9NYI0 1048 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 CDY2AQ9Y6F7 541 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 PPM1LQ5SGD2 360 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 WHAMMQ8TF30 809 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 AGPAT3Q9NRZ7 376 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 KBTBD4Q9NVX7 518 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
NR4A1-215ENST00000550557 SPEF2Q9C093 1822 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 AKAP5P24588 427 aa12.83□□□□□ -0.35
NR4A1-215ENST00000550557 STX2P32856 288 aa12.83□□□□□ -0.35
NR4A1-215ENST00000550557 ITGA7Q13683 1181 aa12.83□□□□□ -0.35
NR4A1-215ENST00000550557 UBA3Q8TBC4 463 aa12.83□□□□□ -0.35
NR4A1-215ENST00000550557 VIPAS39Q9H9C1 493 aa12.83□□□□□ -0.35
NR4A1-215ENST00000550557 INHAP05111 366 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 SMIM10L2AP0DMW4 78 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 SMIM10L2BP0DMW5 78 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 PLTPP55058 493 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 MDM2Q00987 491 aaPredicted RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 PPP1R13LQ8WUF5 828 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 HNRNPLLQ8WVV9 542 aaKnown RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 AGPAT1Q99943 283 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 H0Y626 953 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 GPR25O00155 361 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 TLR2O60603 784 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 GPC4O75487 556 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 GRAP2O75791 330 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 GARTP22102 1010 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 E2F5Q15329 346 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 ANO4Q32M45 955 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 SRLQ86TD4 932 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 SH3KBP1Q96B97 665 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 FAM8A1Q9UBU6 413 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 SCN11AQ9UI33 1791 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 MCF2P10911 925 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 SLC2A3P11169 496 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 NR1D1P20393 614 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 PRAMEP78395 509 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 CRHR2Q13324 411 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 ARHGEF7Q14155 803 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 CCDC38Q502W7 563 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 FBXO47Q5MNV8 452 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 TATDN1Q6P1N9 297 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 RNF10Q8N5U6 811 aaKnown RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 MGARPQ8TDB4 240 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 FAM114A2Q9NRY5 505 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
NR4A1-215ENST00000550557 NFU1Q9UMS0 254 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 PCDHB2Q9Y5E7 798 aa12.83□□□□□ -0.36
NR4A1-215ENST00000550557 ANKRD65E5RJM6 399 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 SOX10P56693 466 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 IFT88Q13099 833 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 PLD1Q13393 1074 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 GTF2H3Q13889 308 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 MAP7Q14244 749 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 CCDC157Q569K6 752 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 ATP6V0D2Q8N8Y2 350 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 LRRN4CLQ8ND94 238 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 OR6P1Q8NGX9 317 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 CALR3Q96L12 384 aaKnown RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 EFCAB14O75071 495 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 KPNA1P52294 538 aaPredicted RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 PDXDC1Q6P996 788 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 LBX2Q6XYB7 198 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 TAS2R42Q7RTR8 314 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 CDKL3Q8IVW4 592 aaPredicted RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 DCUN1D1Q96GG9 259 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 STK33Q9BYT3 514 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 MRPL17Q9NRX2 175 aaKnown RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 ZBTB22O15209 634 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 RNASEH1O60930 286 aaKnown RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 GNRH1P01148 92 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 MSH2P43246 934 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 ARL4DP49703 201 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 GRB10Q13322 594 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 NBPF20Q3BBV1 942 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 ANKRD20A3Q5VUR7 823 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 CFAP36Q96G28 342 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 OSBPL9Q96SU4 736 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 SARS2Q9NP81 518 aaKnown RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms