RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PAX3P23760 479 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 PTPN14Q15678 1187 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 SOWAHAQ2M3V2 549 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 WDR72Q3MJ13 1102 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 PLPP4Q5VZY2 271 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 WSCD1Q658N2 575 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 RSPO2Q6UXX9 243 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-206ENST00000550406 TMC7Q7Z402 723 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 ADGRD2Q7Z7M1 963 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 OSTM1Q86WC4 334 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 CEP57Q86XR8 500 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 RNF214Q8ND24 703 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 TAF4BQ92750 862 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 MRPL38Q96DV4 380 aaKnown RBP14.01□□□□□ -0.17
RAB5C-206ENST00000550406 TCF25Q9BQ70 676 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 RTP3Q9BQQ7 232 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 TTPALQ9BTX7 342 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 RBSNQ9H1K0 784 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 L1RE1Q9UN81 338 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 MTCH2Q9Y6C9 303 aa14.01□□□□□ -0.17
RAB5C-206ENST00000550406 PRRC2BQ5JSZ5 2229 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 SZT2Q5T011 3432 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 CDH23Q9H251 3354 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 C2orf71A6NGG8 1288 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 C2CD2LO14523 706 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 ADAM12O43184 909 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 HCRTO43612 131 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 N4BP1O75113 896 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 SLC9A1P19634 815 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 CDK11BP21127 795 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 GLUD2P49448 558 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 CDH8P55286 799 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 NOP14P78316 857 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 APBA1Q02410 837 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 ZNF699Q32M78 642 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 PDCL2Q8N4E4 241 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 DEFB123Q8N688 67 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 TOP6BLQ8N6T0 577 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 MRPL43Q8N983 215 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 KBTBD7Q8WVZ9 684 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 MYLIPQ8WY64 445 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 RIN2Q8WYP3 895 aaPredicted RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 PIK3R5Q8WYR1 880 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 CDX2Q99626 313 aaPredicted RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 CLSTN3Q9BQT9 956 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 CRACR2AQ9BSW2 395 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 RXFP1Q9HBX9 757 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 NGRNQ9NPE2 291 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 NXF1Q9UBU9 619 aaKnown RBP14□□□□□ -0.17
RAB5C-206ENST00000550406 IRAK3Q9Y616 596 aa14□□□□□ -0.17
RAB5C-206ENST00000550406 GABRDO14764 452 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 TEX33O43247 280 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 OAZ2O95190 189 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 CNPP09543 421 aaKnown RBP13.99□□□□□ -0.17
RAB5C-206ENST00000550406 ODC1P11926 461 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 PON1P27169 355 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 ASPAP45381 313 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 RAP1GAPP47736 663 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 SMC1AQ14683 1233 aaKnown RBP13.99□□□□□ -0.17
RAB5C-206ENST00000550406 ZNF667Q5HYK9 610 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 GPR65Q8IYL9 337 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 NAP1L5Q96NT1 182 aaPredicted RBP13.99□□□□□ -0.17
RAB5C-206ENST00000550406 KLHL5Q96PQ7 755 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 TMEM209Q96SK2 561 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 MRPL45Q9BRJ2 306 aaKnown RBP13.99□□□□□ -0.17
RAB5C-206ENST00000550406 BCO2Q9BYV7 579 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
RAB5C-206ENST00000550406 SMYD3Q9H7B4 428 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 SIX2Q9NPC8 291 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 ENTPD7Q9NQZ7 604 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 STK39Q9UEW8 545 aa13.99□□□□□ -0.17
RAB5C-206ENST00000550406 R3HCC1Q9Y3T6 440 aaKnown RBP13.99□□□□□ -0.17
RAB5C-206ENST00000550406 PTPRDP23468 1912 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 GTPBP10A4D1E9 387 aaKnown RBP13.98□□□□□ -0.17
RAB5C-206ENST00000550406 URODP06132 367 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 LMO2P25791 158 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 FANCCQ00597 558 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 LRMPQ12912 555 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 PSMD5Q16401 504 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 PTPROQ16827 1216 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 OVOS1Q6IE37 1185 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 PDE12Q6L8Q7 609 aaKnown RBP13.98□□□□□ -0.17
RAB5C-206ENST00000550406 KIAA1841Q6NSI8 718 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 PHLDB3Q6NSJ2 640 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 SCARA5Q6ZMJ2 495 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 GBP6Q6ZN66 633 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 DPH6Q7L8W6 267 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 ARHGEF19Q8IW93 802 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 APPL2Q8NEU8 664 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 MICAL1Q8TDZ2 1067 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 KAT5Q92993 513 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
RAB5C-206ENST00000550406 MRPL17Q9NRX2 175 aaKnown RBP13.98□□□□□ -0.17
RAB5C-206ENST00000550406 FNIP2Q9P278 1114 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 MTRRQ9UBK8 725 aa13.98□□□□□ -0.17
RAB5C-206ENST00000550406 BACE2Q9Y5Z0 518 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms