RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 SLC11A2P49281 568 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 CLRN1P58418 232 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 POU6F2P78424 691 aaPredicted RBP6.77□□□□□ -1.33
HCFC2-204ENST00000550335 GALNT1Q10472 559 aaPredicted RBP6.77□□□□□ -1.33
HCFC2-204ENST00000550335 MRPL49Q13405 166 aaKnown RBP6.77□□□□□ -1.33
HCFC2-204ENST00000550335 TAF12Q16514 161 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 CRB2Q5IJ48 1285 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 ZNF365Q70YC5 407 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 NBPF11Q86T75 865 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 ANKRD18AQ8IVF6 992 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 FANCBQ8NB91 859 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 TBC1D15Q8TC07 691 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 TRAPPC12Q8WVT3 735 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 RABGGTAQ92696 567 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 GCC1Q96CN9 775 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 TCF25Q9BQ70 676 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 ISCA1Q9BUE6 129 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 MAGEB5Q9BZ81 275 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 DPH1Q9BZG8 443 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 JADE2Q9NQC1 790 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 FBXO34Q9NWN3 711 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 MID2Q9UJV3 735 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 AGAP1Q9UPQ3 857 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 PLEKHM1Q9Y4G2 1056 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 CDHR4A6H8M9 788 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 HOXA3O43365 443 aaPredicted RBP6.76□□□□□ -1.33
HCFC2-204ENST00000550335 DNAJB5O75953 348 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 HAUS5O94927 633 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 KIF20AO95235 890 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 AMHP03971 560 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 ALAS1P13196 640 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 HGFACQ04756 655 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 DUSP8Q13202 625 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 UBXN2BQ14CS0 331 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 VMACQ2NL98 169 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 CATSPERGQ6ZRH7 1159 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 ADGRE4PQ86SQ3 457 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 KBTBD2Q8IY47 623 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 YAF2Q8IY57 180 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 CACNA2D3Q8IZS8 1091 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 CARFQ8N187 725 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 RNF169Q8NCN4 708 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 ADAMTS17Q8TE56 1095 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 LCORQ96JN0 433 aaPredicted RBP6.76□□□□□ -1.33
HCFC2-204ENST00000550335 ZSCAN31Q96LW9 406 aaPredicted RBP6.76□□□□□ -1.33
HCFC2-204ENST00000550335 POGKQ9P215 609 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 XPR1Q9UBH6 696 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 KCTD3Q9Y597 815 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 PNPLA7Q6ZV29 1317 aa6.76□□□□□ -1.33
HCFC2-204ENST00000550335 NPC1O15118 1278 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 SLC6A2P23975 617 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 KLRC1P26715 233 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 ADAM8P78325 824 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 DLX2Q07687 328 aaPredicted RBP6.75□□□□□ -1.33
HCFC2-204ENST00000550335 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 ATXN7L2Q5T6C5 722 aaPredicted RBP6.75□□□□□ -1.33
HCFC2-204ENST00000550335 LVRNQ6Q4G3 990 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 ZDHHC24Q6UX98 284 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 USP49Q70CQ1 688 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 FRMD5Q7Z6J6 570 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 GLIS1Q8NBF1 620 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 SHCBP1Q8NEM2 672 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 STYXQ8WUJ0 223 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 TFAP2CQ92754 450 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 SPSB4Q96A44 273 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 TMEM176AQ96HP8 235 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 TINAGL1Q9GZM7 467 aaPredicted RBP6.75□□□□□ -1.33
HCFC2-204ENST00000550335 ZHX3Q9H4I2 956 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 TM7SF3Q9NS93 570 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 ZSCAN32Q9NX65 697 aa6.75□□□□□ -1.33
HCFC2-204ENST00000550335 MBD3L4A6NDZ8 208 aaPredicted RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 MBD3L3A6NE82 208 aaPredicted RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 ACKR2O00590 384 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 AREL1O15033 823 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 TNFRSF6BO95407 300 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 ITGB1P05556 798 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 TXNP10599 105 aaKnown RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 IDEP14735 1019 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 IL1R1P14778 569 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 IL1R2P27930 398 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 IRAK1P51617 712 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 RIN1Q13671 783 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 SLC29A2Q14542 456 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 RAB30Q15771 203 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 VWA3BQ502W6 1294 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 ARHGAP15Q53QZ3 475 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 JAKMIP3Q5VZ66 844 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 SLC30A10Q6XR72 485 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 ATG14Q6ZNE5 492 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 SUGP1Q8IWZ8 645 aaKnown RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 FITM2Q8N6M3 262 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 TMIEQ8NEW7 156 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 DDX17Q92841 729 aaKnown RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 CPPED1Q9BRF8 314 aaPredicted RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 TMEM120AQ9BXJ8 343 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 EIF2AQ9BY44 585 aaKnown RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 TTYH3Q9C0H2 523 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 ENKD1Q9H0I2 346 aa6.74□□□□□ -1.33
HCFC2-204ENST00000550335 RLIMQ9NVW2 624 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms