RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 EDRF1Q3B7T1 1238 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 RSPO2Q6UXX9 243 aaPredicted RBP27.96■■■□□ 2.07
CPSF6-205ENST00000550075 RTL10Q7L3V2 364 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 OR5B17Q8NGF7 314 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 RHOBTB2Q9BYZ6 727 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 CCDC195A0A1B0GUA6 201 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 MAPK13O15264 365 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 C8AP07357 584 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 HNRNPA1P09651 372 aaKnown RBP eCLIP27.95■■■□□ 2.06
CPSF6-205ENST00000550075 HOXA9P31269 272 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 ELF1P32519 619 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 PPM1LQ5SGD2 360 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 TPGS2Q68CL5 300 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 ZNF461Q8TAF7 563 aa27.95■■■□□ 2.06
CPSF6-205ENST00000550075 HUS1O60921 280 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 PRCPP42785 496 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 UVSSAQ2YD98 709 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 ZCWPW2Q504Y3 356 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 TRAPPC11Q7Z392 1133 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 GJD3Q8N144 294 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 SMG7Q92540 1137 aaKnown RBP27.94■■■□□ 2.06
CPSF6-205ENST00000550075 FAM84AQ96KN4 292 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 PIDD1Q9HB75 910 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 SIX4Q9UIU6 781 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 MAN1B1Q9UKM7 699 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 MAFFQ9ULX9 164 aa27.94■■■□□ 2.06
CPSF6-205ENST00000550075 WDR27A2RRH5 827 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 GOLGA6L22H0YM25 854 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 TNFRSF10AO00220 468 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 PSMA7O14818 248 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 RFPL2O75678 378 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 THEM5Q8N1Q8 247 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 CXorf38Q8TB03 319 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 SLC7A14Q8TBB6 771 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 TMC2Q8TDI7 906 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 PARD3BQ8TEW8 1205 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 NR2E1Q9Y466 385 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 VCANP13611 3396 aa27.93■■■□□ 2.06
CPSF6-205ENST00000550075 BDP1A6H8Y1 2624 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 C2orf16Q68DN1 1984 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 DENND4AQ7Z401 1863 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 PRRG1O14668 218 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 XYLBO75191 536 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 ABLIM3O94929 683 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 PAPLNO95428 1278 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 WEE2P0C1S8 567 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 KRT13P13646 458 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 CASP4P49662 377 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 ADAM9Q13443 819 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 INTS8Q75QN2 995 aaKnown RBP27.92■■■□□ 2.06
CPSF6-205ENST00000550075 HPDLQ96IR7 371 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 PRKD2Q9BZL6 878 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 POMKQ9H5K3 350 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 GDAP2Q9NXN4 497 aa27.92■■■□□ 2.06
CPSF6-205ENST00000550075 AFF4Q9UHB7 1163 aaKnown RBP27.92■■■□□ 2.06
CPSF6-205ENST00000550075 PHACTR2O75167 634 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 ATF2P15336 505 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 PSMC2P35998 433 aaKnown RBP27.91■■■□□ 2.06
CPSF6-205ENST00000550075 LRRC63Q05C16 580 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 BIRC3Q13489 604 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 TRPC3Q13507 836 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 FAM186BQ8IYM0 893 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 ADSSL1Q8N142 457 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 TMEM86AQ8N2M4 240 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 SPATA18Q8TC71 538 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 BORCS6Q96GS4 357 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 CDH22Q9UJ99 828 aa27.91■■■□□ 2.06
CPSF6-205ENST00000550075 C19orf67A6NJJ6 358 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 LRRIQ3A6PVS8 624 aaPredicted RBP27.9■■■□□ 2.06
CPSF6-205ENST00000550075 CETN3O15182 167 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 POU2F2P09086 479 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 ENPEPQ07075 957 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 WSCD1Q658N2 575 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 CENPPQ6IPU0 288 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 ZNF707Q96C28 371 aaPredicted RBP27.9■■■□□ 2.06
CPSF6-205ENST00000550075 RPGRIP1Q96KN7 1286 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 MKNK1Q9BUB5 465 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 SNX9Q9Y5X1 595 aa27.9■■■□□ 2.06
CPSF6-205ENST00000550075 EPB41P11171 864 aaKnown RBP27.89■■■□□ 2.06
CPSF6-205ENST00000550075 CLDN10P78369 228 aa27.89■■■□□ 2.06
CPSF6-205ENST00000550075 TCEAL8Q8IYN2 117 aa27.89■■■□□ 2.06
CPSF6-205ENST00000550075 TOP6BLQ8N6T0 577 aa27.89■■■□□ 2.06
CPSF6-205ENST00000550075 TRIML1Q8N9V2 468 aa27.89■■■□□ 2.06
CPSF6-205ENST00000550075 PLEKHO2Q8TD55 490 aa27.89■■■□□ 2.06
CPSF6-205ENST00000550075 DHTKD1Q96HY7 919 aaPredicted RBP27.89■■■□□ 2.06
CPSF6-205ENST00000550075 GZF1Q9H116 711 aaPredicted RBP27.89■■■□□ 2.06
CPSF6-205ENST00000550075 CYP4F11Q9HBI6 524 aa27.89■■■□□ 2.06
CPSF6-205ENST00000550075 LOC730098B7Z3J9 87 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 AKAP3O75969 853 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 LRG1P02750 347 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 VAMP7P51809 220 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 GPR17Q13304 367 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 MORC3Q14149 939 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 ISM2Q6H9L7 571 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 DPH6Q7L8W6 267 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 TDRD5Q8NAT2 981 aaKnown RBP27.88■■■□□ 2.05
CPSF6-205ENST00000550075 SYAP1Q96A49 352 aaPredicted RBP27.88■■■□□ 2.05
CPSF6-205ENST00000550075 L1RE1Q9UN81 338 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 CLUHO75153 1309 aa27.88■■■□□ 2.05
CPSF6-205ENST00000550075 BIN1O00499 593 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms