RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, human

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFDN5-208	ENST00000549995	KLHL40	Q2TBA0	621 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	PUS10	Q3MIT2	529 aa	Known RBP	12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	CCDC183	Q5T5S1	534 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	CEP135	Q66GS9	1140 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	ISM2	Q6H9L7	571 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	SYCE2	Q6PIF2	218 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	CYP26C1	Q6V0L0	522 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	RBM23	Q86U06	439 aa	Known RBP	12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	TMEM86A	Q8N2M4	240 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	NOC3L	Q8WTT2	800 aa	Known RBP	12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	SUSD6	Q92537	303 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	TAF4B	Q92750	862 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	SLC35C1	Q96A29	364 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	FAXDC2	Q96IV6	333 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	RTP3	Q9BQQ7	232 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	S1PR5	Q9H228	398 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	PLEKHA4	Q9H4M7	779 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	METTL14	Q9HCE5	456 aa	Known RBP	12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	DPP7	Q9UHL4	492 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	FBXL5	Q9UKA1	691 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	CTNND2	Q9UQB3	1225 aa		12.82	□□□□□ -0.36
PFDN5-208	ENST00000549995	OR6C75	A6NL08	312 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	C2CD2L	O14523	706 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	GABRD	O14764	452 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	TGM5	O43548	720 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	TACC1	O75410	805 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	GLUD1	P00367	558 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	CST3	P01034	146 aa	Predicted RBP	12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	KRT13	P13646	458 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	EPCAM	P16422	314 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	RBM10	P98175	930 aa	Known RBP	12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	ROR1	Q01973	937 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	YWHAH	Q04917	246 aa	Predicted RBP	12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	PPP3CA	Q08209	521 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	MYO1E	Q12965	1108 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	SMAD4	Q13485	552 aa	Known RBP	12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	AAK1	Q2M2I8	961 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	DPCR1	Q3MIW9	517 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	TPGS2	Q68CL5	300 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	OVOS1	Q6IE37	1185 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	DSTYK	Q6XUX3	929 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	SV2A	Q7L0J3	742 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	CEP57	Q86XR8	500 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	CSGALNACT2	Q8N6G5	542 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	ZNF461	Q8TAF7	563 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	PPM1E	Q8WY54	764 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	TMEM8A	Q9HCN3	771 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	TMEM63C	Q9P1W3	806 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	HSFX1	Q9UBD0	423 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	DACH1	Q9UI36	760 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	L1RE1	Q9UN81	338 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	COQ4	Q9Y3A0	265 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	CDY1	Q9Y6F8	540 aa		12.81	□□□□□ -0.36
PFDN5-208	ENST00000549995	NOTCH4	Q99466	2003 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	WDR27	A2RRH5	827 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	CYB561D2	O14569	222 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	MBTPS2	O43462	519 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	STX10	O60499	249 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	CSPG5	O95196	566 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	GNA14	O95837	355 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	ASS1	P00966	412 aa	Known RBP	12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	RPL17	P18621	184 aa	Known RBP	12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	KLRC2	P26717	231 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	MRPS5	P82675	430 aa	Known RBP	12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	ITIH3	Q06033	890 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	SMAD2	Q15796	467 aa	Known RBP	12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	UVSSA	Q2YD98	709 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	TRIM59	Q8IWR1	403 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	PDCL2	Q8N4E4	241 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	KBTBD7	Q8WVZ9	684 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	SYAP1	Q96A49	352 aa	Predicted RBP	12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	HPDL	Q96IR7	371 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	PKMYT1	Q99640	499 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	IGFLR1	Q9H665	355 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	SFXN1	Q9H9B4	322 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	MAN1C1	Q9NR34	630 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	ZDHHC7	Q9NXF8	308 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	ARMCX3	Q9UH62	379 aa	Predicted RBP	12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	CD207	Q9UJ71	328 aa		12.8	□□□□□ -0.36
PFDN5-208	ENST00000549995	BDP1	A6H8Y1	2624 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	PATJ	Q8NI35	1801 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	GRXCR2	A6NFK2	248 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	VNN2	O95498	520 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	KRT19	P08727	400 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	HNRNPA1	P09651	372 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	TRIM49	P0CI25	452 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	TRIM49C	P0CI26	452 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	ATF2	P15336	505 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	KCNA5	P22460	613 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	WARS	P23381	471 aa	Known RBP	12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	OR1D2	P34982	312 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	TFF2	Q03403	129 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	GPR17	Q13304	367 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	NCOA4	Q13772	614 aa		12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	SKIV2L	Q15477	1246 aa	Known RBP	12.79	□□□□□ -0.36
PFDN5-208	ENST00000549995	SOWAHA	Q2M3V2	549 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms