RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 RABEPKQ7Z6M1 372 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 SGMS1Q86VZ5 419 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 RASSF3Q86WH2 238 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 CCDC82Q8N4S0 544 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 DEFB119Q8N690 84 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 MDGA1Q8NFP4 955 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 EXOC4Q96A65 974 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 CHFRQ96EP1 664 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 CCDC51Q96ER9 411 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 JAKMIP1Q96N16 626 aaKnown RBP9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 CEP89Q96ST8 783 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 MAP3K14Q99558 947 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 P2RY13Q9BPV8 354 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 JPH2Q9BR39 696 aaPredicted RBP9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 TRIM4Q9C037 500 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 EBF3Q9H4W6 596 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 OBP2AQ9NY56 170 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 PCOLCE2Q9UKZ9 415 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 NAP1L2Q9ULW6 460 aaPredicted RBP9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 PAXBP1Q9Y5B6 917 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 SNX14Q9Y5W7 946 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 NUP210Q8TEM1 1887 aaPredicted RBP9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 KIAA1549LQ6ZVL6 1849 aa9.16□□□□□ -0.94
SMARCD1-207ENST00000549526 OTOL1A6NHN0 477 aaPredicted RBP9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 PLK4O00444 970 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 CHMP2AO43633 222 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 TSPAN1O60635 241 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 CBFA2T3O75081 653 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 B3GAT3O94766 335 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 THP07101 528 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 ATXN1LP0C7T5 689 aaKnown RBP9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 CPA1P15085 419 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 P2RY2P41231 377 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 EXOSC10Q01780 885 aaKnown RBP9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 RHDQ02161 417 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 LAMTOR4Q0VGL1 99 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 XKR3Q5GH77 459 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 PEAR1Q5VY43 1037 aaPredicted RBP9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 SLC8B1Q6J4K2 584 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 BLOC1S2Q6QNY1 142 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 FANCBQ8NB91 859 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 OLIG1Q8TAK6 271 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 PRDM16Q9HAZ2 1276 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 RIC8AQ9NPQ8 531 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 AK5Q9Y6K8 562 aa9.15□□□□□ -0.94
SMARCD1-207ENST00000549526 KLF18A0A0U1RQI7 1052 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 E9PAM4 449 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 I3L4J1 428 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 ZBTB43O43298 467 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 AP5Z1O43299 807 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 TRAPPC3O43617 180 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 GJB3O75712 270 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 ALDH1A2O94788 518 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 NPTXRO95502 500 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 KRT10P13645 584 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 IGFBP6P24592 240 aaPredicted RBP9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 PSMA5P28066 241 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 MCM2P49736 904 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 NAPAP54920 295 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 SETQ01105 290 aaPredicted RBP9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 BYSLQ13895 437 aaKnown RBP9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 RTN1Q16799 776 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 PLEKHG6Q3KR16 790 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 PREPLQ4J6C6 727 aaPredicted RBP9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 PRR16Q569H4 304 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 CCDC157Q569K6 752 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 GPR158Q5T848 1215 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 TPGS2Q68CL5 300 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 TRIM68Q6AZZ1 485 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 APOA5Q6Q788 366 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 Q6ZUG5 572 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 RNF149Q8NC42 400 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 PSPC1Q8WXF1 523 aaKnown RBP9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 KCNB2Q92953 911 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 TMEM143Q96AN5 459 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 NXPE2Q96DL1 559 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 DDX27Q96GQ7 796 aaKnown RBP9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 PI4K2AQ9BTU6 479 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 ATXN3LQ9H3M9 355 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 TOR4AQ9NXH8 423 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 BCCIPQ9P287 314 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 BRPF3Q9ULD4 1205 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 NOTCH2Q04721 2471 aa9.14□□□□□ -0.95
SMARCD1-207ENST00000549526 ZNF638Q14966 1978 aaKnown RBP9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 ARID2Q68CP9 1835 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 GOLGA8AA7E2F4 631 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 GOLGA8BA8MQT2 603 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 INO80B-WBP1J3KQ70 363 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 SFNP31947 248 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 ADCY7P51828 1080 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 RPL6Q02878 288 aaKnown RBP9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.957e-11■■■■■ 37.1
SMARCD1-207ENST00000549526 NAIF1Q69YI7 327 aaPredicted RBP9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 ZNF574Q6ZN55 896 aaPredicted RBP9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 TMTC3Q6ZXV5 915 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 CDR2LQ86X02 465 aaPredicted RBP9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 PGBD3Q8N328 593 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 CCDC33Q8N5R6 958 aa9.13□□□□□ -0.95
SMARCD1-207ENST00000549526 CCDC26Q8TAB7 109 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms