RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.12■□□□□ 0.01
CACNB3-211ENST00000549226 ZSCAN30Q86W11 494 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 COLGALT2Q8IYK4 626 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 RBBP8NLQ8NC74 664 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-211ENST00000549226 APPL2Q8NEU8 664 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 BADQ92934 168 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 EIF3CQ99613 913 aaKnown RBP15.12■□□□□ 0.01
CACNB3-211ENST00000549226 ARID3AQ99856 593 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 HAUS4Q9H6D7 363 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 POLIQ9UNA4 740 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 EPN1Q9Y6I3 576 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-211ENST00000549226 TTC3P53804 2025 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 ATP8B3O60423 1300 aa15.12■□□□□ 0.01
CACNB3-211ENST00000549226 SOWAHDA6NJG2 315 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 PPEF2O14830 753 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 CYP26A1O43174 497 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 ZSCAN12O43309 604 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 NDUFA10O95299 355 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 LCA5LO95447 670 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 ODC1P11926 461 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 CYP11B1P15538 503 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 WARSP23381 471 aaKnown RBP15.11■□□□□ 0.01
CACNB3-211ENST00000549226 KIF11P52732 1056 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 ELAVL2Q12926 359 aaKnown RBP15.11■□□□□ 0.01
CACNB3-211ENST00000549226 STILQ15468 1287 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 SPA17Q15506 151 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 SLC18A3Q16572 532 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 TRIM72Q6ZMU5 477 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 CMTR2Q8IYT2 770 aaKnown RBP15.11■□□□□ 0.01
CACNB3-211ENST00000549226 PHOSPHO2Q8TCD6 241 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 EPS8L1Q8TE68 723 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 ZNF830Q96NB3 372 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-211ENST00000549226 CHP1Q99653 195 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 COLEC11Q9BWP8 271 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 NT5C1AQ9BXI3 368 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 SMYD3Q9H7B4 428 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 KCND1Q9NSA2 647 aa15.11■□□□□ 0.01
CACNB3-211ENST00000549226 PDCD11Q14690 1871 aaKnown RBP15.1■□□□□ 0.01
CACNB3-211ENST00000549226 GOLGA6L9A6NEM1 432 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 CCDC85CA6NKD9 419 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 RBAK-RBAKDNI3L0D1 243 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 M0QZQ0 153 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 CYB561D2O14569 222 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 MED7O43513 233 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 ALDH2P05091 517 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 WEE2P0C1S8 567 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 CCDC175P0C221 793 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 CD58P19256 250 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 TYMPP19971 482 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 MSNP26038 577 aaKnown RBP15.1■□□□□ 0.01
CACNB3-211ENST00000549226 GNA15P30679 374 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 CLCN1P35523 988 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 EIF4A3P38919 411 aaKnown RBP15.1■□□□□ 0.01
CACNB3-211ENST00000549226 LHX1P48742 406 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 CDR2Q01850 454 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 ASTE1Q2TB18 679 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-211ENST00000549226 DSTYKQ6XUX3 929 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 ADGRF2Q8IZF7 708 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 TNS4Q8IZW8 715 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 HERVK_113Q902F9 699 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 DPF3Q92784 378 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 SLC9A7Q96T83 725 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 AGPAT1Q99943 283 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 SYT11Q9BT88 431 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 STK39Q9UEW8 545 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 NOCTQ9UK39 431 aaKnown RBP15.1■□□□□ 0.01
CACNB3-211ENST00000549226 TET1Q8NFU7 2136 aa15.1■□□□□ 0.01
CACNB3-211ENST00000549226 LTBP2Q14767 1821 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 SPTLC1O15269 473 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 DDHD2O94830 711 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 CYP11A1P05108 521 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 PNMA6AP0CW24 399 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-211ENST00000549226 ACRP10323 421 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 TNFAIP3P21580 790 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 OR1G1P47890 313 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 SOWAHAQ2M3V2 549 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 SCARA3Q6AZY7 606 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 RAD9BQ6WBX8 426 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 ZNF365Q70YC5 407 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 ZNF571Q7Z3V5 609 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-211ENST00000549226 SLC47A2Q86VL8 602 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 METTL23Q86XA0 190 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 KIAA1524Q8TCG1 905 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 ZNF689Q96CS4 500 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-211ENST00000549226 TMEM176AQ96HP8 235 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 TNIP3Q96KP6 325 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 SUSD3Q96L08 255 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 SNX25Q9H3E2 840 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 NRDE2Q9H7Z3 1164 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 RC3H2Q9HBD1 1191 aaKnown RBP15.09■□□□□ 0.01
CACNB3-211ENST00000549226 L1RE1Q9UN81 338 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 MICAL3Q7RTP6 2002 aa15.09■□□□□ 0.01
CACNB3-211ENST00000549226 ZBBXA8MT70 800 aa15.08■□□□□ 0
CACNB3-211ENST00000549226 SYN3O14994 580 aa15.08■□□□□ 0
CACNB3-211ENST00000549226 KIF4AO95239 1232 aa15.08■□□□□ 0
CACNB3-211ENST00000549226 LSM8O95777 96 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms