RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ISL2Q96A47 359 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 HES6Q96HZ4 224 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 EPSTI1Q96J88 318 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 FRMD6Q96NE9 622 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 PPP1R2P1Q96PQ5 205 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SUCLA2Q9P2R7 463 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 PCDHA3Q9Y5H8 950 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 HIP1RO75146 1068 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 PAPSS2O95340 614 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 GYPCP04921 128 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 CDK18Q07002 472 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 AGERQ15109 404 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 DEFB115Q30KQ5 88 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 WDR93Q6P2C0 686 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 LCLAT1Q6UWP7 414 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 MON1BQ7L1V2 547 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 LRRC34Q8IZ02 419 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ARRDC4Q8NCT1 418 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 C1orf74Q96LT6 269 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 TSG101Q99816 390 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ELP3Q9H9T3 547 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 TMEM161AQ9NX61 479 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ANKFY1Q9P2R3 1169 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 TSPAN11A1L157 253 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 UBE2Q2LH0YL09 131 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 KLF4O43474 513 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 USO1O60763 962 aaKnown RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 AFPP02771 609 aaKnown RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 NR3C1P04150 777 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 GSTA2P09210 222 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SMIM10L2AP0DMW4 78 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SMIM10L2BP0DMW5 78 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ATF7P17544 494 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 PON1P27169 355 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 FMO5P49326 533 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 STAT5BP51692 787 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 DPCR1Q3MIW9 517 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 LILRB2Q8N423 598 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 MMGT1Q8N4V1 131 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 XXYLT1Q8NBI6 393 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SMG8Q8ND04 991 aaKnown RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 PLEKHO2Q8TD55 490 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ASAP3Q8TDY4 903 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SNX29Q8TEQ0 813 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 WHAMMQ8TF30 809 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SUSD3Q96L08 255 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 CAPNS2Q96L46 248 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 TSGA13Q96PP4 275 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ZCWPW1Q9H0M4 648 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 MINDY3Q9H8M7 445 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 RAVER2Q9HCJ3 691 aaKnown RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ABHD10Q9NUJ1 306 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 MKS1Q9NXB0 559 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ZFP37Q9Y6Q3 630 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 CLRN2A0PK11 232 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 POLR2DO15514 142 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 TPM4P67936 248 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 IRX3P78415 501 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 RING1Q06587 406 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 CACNB2Q08289 660 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 STK4Q13043 487 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 RAB33AQ14088 237 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 PTPRNQ16849 979 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 ARSIQ5FYB1 569 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 COX20Q5RI15 118 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 GJD3Q8N144 294 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 HSFY1Q96LI6 401 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 PLCD4Q9BRC7 762 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 MRPL9Q9BYD2 267 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 GBP3Q9H0R5 595 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 KCNF1Q9H3M0 494 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF358Q9NW07 568 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 MARK1Q9P0L2 795 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 STIM2Q9P246 746 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 SEPT9Q9UHD8 586 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 FEZ2Q9UHY8 353 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 TPX2Q9ULW0 747 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 POLIQ9UNA4 740 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 F8VZ95 297 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 ABLIM3O94929 683 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 CELF2O95319 508 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 CDKN1CP49918 316 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 PLK1P53350 603 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 LAMTOR4Q0VGL1 99 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 CFAP221Q4G0U5 840 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 RSRC2Q7L4I2 434 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 WDR75Q8IWA0 830 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 HNRNPABQ99729 332 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 USB1Q9BQ65 265 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 ARHGAP9Q9BRR9 750 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 NOC4LQ9BVI4 516 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 TRIM55Q9BYV6 548 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 CELF4Q9BZC1 486 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 EIF2B3Q9NR50 452 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 SIRPGQ9P1W8 387 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 DNMT3BQ9UBC3 853 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 APEX2Q9UBZ4 518 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 DOCK3Q8IZD9 2030 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 CFAP69A5D8W1 941 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 KCNJ18B7U540 433 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms