RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 KIAA1586Q9HCI6 787 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 RBAKQ9NYW8 714 aaPredicted RBP12.31□□□□□ -0.44
BEST3-209ENST00000548658 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
BEST3-209ENST00000548658 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 CYB561D2O14569 222 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 EIF3DO15371 548 aaKnown RBP eCLIP12.3□□□□□ -0.44
BEST3-209ENST00000548658 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
BEST3-209ENST00000548658 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
BEST3-209ENST00000548658 NARSO43776 548 aaKnown RBP12.3□□□□□ -0.44
BEST3-209ENST00000548658 ECI2O75521 394 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 PRPF6O94906 941 aaKnown RBP12.3□□□□□ -0.44
BEST3-209ENST00000548658 AOC1P19801 751 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 ALDH1A3P47895 512 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 TUFMP49411 452 aaKnown RBP12.3□□□□□ -0.44
BEST3-209ENST00000548658 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 CASP5P51878 434 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 EPHB3P54753 998 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 ASIC1P78348 528 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 TWF1Q12792 350 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 PARM1Q6UWI2 310 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 BRSK2Q8IWQ3 736 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 GPD1LQ8N335 351 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 TMEM105Q8N8V8 129 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 PRSS33Q8NF86 280 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
BEST3-209ENST00000548658 FGF14Q92915 247 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 ASAH2Q9NR71 780 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 PCDHA7Q9UN72 937 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 ASB3Q9Y575 518 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 DOCK6Q96HP0 2047 aa12.3□□□□□ -0.44
BEST3-209ENST00000548658 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 ZNF233A6NK53 670 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 TULP1O00294 542 aaPredicted RBP12.29□□□□□ -0.44
BEST3-209ENST00000548658 PPEF2O14830 753 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 SPTLC1O15269 473 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 FGF19O95750 216 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 NPR3P17342 541 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 EPHA5P54756 1037 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 TFAMQ00059 246 aaKnown RBP12.29□□□□□ -0.44
BEST3-209ENST00000548658 TCF15Q12870 199 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 DUSP4Q13115 394 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 FOXD4L6Q3SYB3 417 aaPredicted RBP12.29□□□□□ -0.44
BEST3-209ENST00000548658 PRSS36Q5K4E3 855 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 FAM26FQ5R3K3 315 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 RESP18Q5W5W9 173 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 CENPPQ6IPU0 288 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 FOXD4L3Q6VB84 417 aaPredicted RBP12.29□□□□□ -0.44
BEST3-209ENST00000548658 UNC13DQ70J99 1090 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 ITIH5Q86UX2 942 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 ZNF507Q8TCN5 953 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 GPR152Q8TDT2 470 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 SAAL1Q96ER3 474 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 MCRS1Q96EZ8 462 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 ARHGEF3Q9NR81 526 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 CGNQ9P2M7 1197 aaKnown RBP12.29□□□□□ -0.44
BEST3-209ENST00000548658 ITGA11Q9UKX5 1188 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 MYH15Q9Y2K3 1946 aa12.29□□□□□ -0.44
BEST3-209ENST00000548658 WDFY4Q6ZS81 3184 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 KMT2EQ8IZD2 1858 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 GPC5P78333 572 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 RBP5P82980 135 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 PRKCQQ04759 706 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 DNM1Q05193 864 aaKnown RBP12.28□□□□□ -0.44
BEST3-209ENST00000548658 SLC5A9Q2M3M2 681 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 CWF19L1Q69YN2 538 aaKnown RBP12.28□□□□□ -0.44
BEST3-209ENST00000548658 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 EFCAB13Q8IY85 973 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 DCP1BQ8IZD4 617 aaKnown RBP12.28□□□□□ -0.44
BEST3-209ENST00000548658 TMEM86AQ8N2M4 240 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 LRRC52Q8N7C0 313 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 SPATA18Q8TC71 538 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 ING5Q8WYH8 240 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
BEST3-209ENST00000548658 E2F7Q96AV8 911 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 ELSPBP1Q96BH3 223 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 CBWD1Q9BRT8 395 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 RPP25Q9BUL9 199 aaKnown RBP12.28□□□□□ -0.44
BEST3-209ENST00000548658 IKZF4Q9H2S9 585 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 PCIF1Q9H4Z3 704 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 ZFP14Q9HCL3 533 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 CEP72Q9P209 647 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 USP25Q9UHP3 1055 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 CA14Q9ULX7 337 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 UBE4BO95155 1302 aa12.28□□□□□ -0.44
BEST3-209ENST00000548658 MTMR11A4FU01 709 aa12.27□□□□□ -0.45
BEST3-209ENST00000548658 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
BEST3-209ENST00000548658 HUS1O60921 280 aa12.27□□□□□ -0.45
BEST3-209ENST00000548658 PRPF40AO75400 957 aaKnown RBP12.27□□□□□ -0.45
BEST3-209ENST00000548658 ITGB3P05106 788 aa12.27□□□□□ -0.45
BEST3-209ENST00000548658 MYL1P05976 194 aa12.27□□□□□ -0.45
BEST3-209ENST00000548658 OR4Q2P0C623 313 aa12.27□□□□□ -0.45
BEST3-209ENST00000548658 TMEM191BP0C7N4 346 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms