RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 MPHOSPH6Q99547 160 aaKnown RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 NMUR2Q9GZQ4 415 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 ACP6Q9NPH0 428 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 DDX25Q9UHL0 483 aaKnown RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 FRMD4BQ9Y2L6 1034 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 AK5Q9Y6K8 562 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 FAM237BA0A1B0GVD1 139 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 TRAFD1O14545 582 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 CALUO43852 315 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 OXSR1O95747 527 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 ATXN3P54252 364 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 PDK4Q16654 411 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 TMCO4Q5TGY1 634 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 SIX5Q8N196 739 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 TRIML2Q8N7C3 387 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 PNMA5Q96PV4 448 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 OSBPL8Q9BZF1 889 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 PACSIN3Q9UKS6 424 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 COG5Q9UP83 839 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
RBFOX1-208ENST00000547372 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 GOLGA8MH3BSY2 632 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 M0R2N6 131 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PHEXP78562 749 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 CLUL1Q15846 466 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 LNX1Q8TBB1 728 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 RAD54LQ92698 747 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 TRNAU1APQ9NX07 287 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 DDX43Q9NXZ2 648 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 NEU2Q9Y3R4 380 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PCDHGB5Q9Y5G0 923 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 SYNGAP1Q96PV0 1343 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PLA2G4BP0C869 781 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PRDX5P30044 214 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 CIITAP33076 1130 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 FAM186BQ8IYM0 893 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 ULK2Q8IYT8 1036 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PPP1R14CQ8TAE6 165 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 ERMNQ8TAM6 284 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 HOMER2Q9NSB8 354 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 RRN3Q9NYV6 651 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 NDUFA13Q9P0J0 144 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 SLC7A8Q9UHI5 535 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 KRT38O76015 456 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 RXRBP28702 533 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 KAZNQ674X7 775 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PPP4R1Q8TF05 950 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 TSSK1BQ9BXA7 367 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 PCYOX1Q9UHG3 505 aa12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 HBS1LQ9Y450 684 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-208ENST00000547372 POTEB3A0JP26 581 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 A8MXQ7 604 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 POTECB2RU33 542 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 STRNO43815 780 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 FTLP02792 175 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 TFAP2AP05549 437 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 IL2RBP14784 551 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 HSPA6P17066 643 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 CRABP2P29373 138 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 EMP3P54852 163 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 RELAQ04206 551 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 POTEBQ6S5H4 581 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 EYA3Q99504 573 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 ARPC5LQ9BPX5 153 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 HEPHQ9BQS7 1158 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 TLE6Q9H808 572 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 KIAA1586Q9HCI6 787 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 HNRNPCL1O60812 293 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 SORBS2O94875 1100 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 KRT5P13647 590 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 LMNB1P20700 586 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 SLC5A2P31639 672 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 SLC25A3Q00325 362 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 GK3PQ14409 553 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 CCDC127Q96BQ5 260 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 TUBB6Q9BUF5 446 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 DCP1AQ9NPI6 582 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 DNAJC12Q9UKB3 198 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 MAD1L1Q9Y6D9 718 aa12.56□□□□□ -0.4
RBFOX1-208ENST00000547372 ATP2A1O14983 1001 aa12.55□□□□□ -0.4
RBFOX1-208ENST00000547372 OCM2P0CE71 109 aa12.55□□□□□ -0.4
RBFOX1-208ENST00000547372 OCMP0CE72 109 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-208ENST00000547372 HIBADHP31937 336 aaKnown RBP12.55□□□□□ -0.4
RBFOX1-208ENST00000547372 ARL4CP56559 192 aa12.55□□□□□ -0.4
RBFOX1-208ENST00000547372 GEMIN4P57678 1058 aaKnown RBP12.55□□□□□ -0.4
RBFOX1-208ENST00000547372 KRT81Q14533 505 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms