RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 CYP4F11Q9HBI6 524 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 INTS13Q9NVM9 706 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.15■□□□□ 0.34
DDX54-204ENST00000546898 KPNA7A9QM74 516 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 CYB561D2O14569 222 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 PRRG1O14668 218 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 CLIC2O15247 247 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 PRPF40AO75400 957 aaKnown RBP17.14■□□□□ 0.33
DDX54-204ENST00000546898 TNNC2P02585 160 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 GBP2P32456 591 aaPredicted RBP17.14■□□□□ 0.33
DDX54-204ENST00000546898 CYP2J2P51589 502 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 MTMR3Q13615 1198 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 KCNB1Q14721 858 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 GRASPQ7Z6J2 395 aaPredicted RBP17.14■□□□□ 0.33
DDX54-204ENST00000546898 METTL23Q86XA0 190 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 CXorf38Q8TB03 319 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 TMEM174Q8WUU8 243 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 BORCS6Q96GS4 357 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 LRFN3Q9BTN0 628 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 MTMR12Q9C0I1 747 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 EPS15L1Q9UBC2 864 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 POLIQ9UNA4 740 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 AGAP1Q9UPQ3 857 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 INSL5Q9Y5Q6 135 aa17.14■□□□□ 0.33
DDX54-204ENST00000546898 ZFP37Q9Y6Q3 630 aaPredicted RBP17.14■□□□□ 0.33
DDX54-204ENST00000546898 FAM86C2PA6NEL3 165 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 TULP1O00294 542 aaPredicted RBP17.13■□□□□ 0.33
DDX54-204ENST00000546898 PDXKO00764 312 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
DDX54-204ENST00000546898 FSHRP23945 695 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 RBP5P82980 135 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 CYP24A1Q07973 514 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 ADCY1Q08828 1119 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 SIGLEC14Q08ET2 396 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 GPR17Q13304 367 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 PSMD6Q15008 389 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 DUOXA2Q1HG44 320 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 GET4Q7L5D6 327 aaPredicted RBP17.13■□□□□ 0.33
DDX54-204ENST00000546898 SLC9A9Q8IVB4 645 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 UBALD2Q8IYN6 164 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
DDX54-204ENST00000546898 FNBP1Q96RU3 617 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 CGRRF1Q99675 332 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 AVENQ9NQS1 362 aaPredicted RBP17.13■□□□□ 0.33
DDX54-204ENST00000546898 IGSF9Q9P2J2 1179 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
DDX54-204ENST00000546898 PTPRJQ12913 1337 aa17.13■□□□□ 0.33
DDX54-204ENST00000546898 EXOC3O60645 756 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 SEC24AO95486 1093 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 KRT19P08727 400 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 MYO1EQ12965 1108 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 PLD1Q13393 1074 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 PABPC1LQ4VXU2 614 aaKnown RBP17.12■□□□□ 0.33
DDX54-204ENST00000546898 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
DDX54-204ENST00000546898 RNF19BQ6ZMZ0 732 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 TRIM67Q6ZTA4 783 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 THEM5Q8N1Q8 247 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 ELMOD1Q8N336 334 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 SPATA18Q8TC71 538 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 NXPE3Q969Y0 559 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 MYADMQ96S97 322 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 HSFX1Q9UBD0 423 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 LIMD1Q9UGP4 676 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 SIX4Q9UIU6 781 aa17.12■□□□□ 0.33
DDX54-204ENST00000546898 HUS1O60921 280 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 ASGR2P07307 311 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 OR4Q2P0C623 313 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 SMARCB1Q12824 385 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 BFSP1Q12934 665 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 TMEM86AQ8N2M4 240 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 RDH13Q8NBN7 331 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 ENGASEQ8NFI3 743 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 OR5B17Q8NGF7 314 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 OR10T2Q8NGX3 314 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 MFSD14AQ96MC6 490 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 GDAP2Q9NXN4 497 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 DNMT3BQ9UBC3 853 aaKnown RBP17.11■□□□□ 0.33
DDX54-204ENST00000546898 YIPF1Q9Y548 306 aa17.11■□□□□ 0.33
DDX54-204ENST00000546898 ZNF318Q5VUA4 2279 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 MTMR11A4FU01 709 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 CALUO43852 315 aaPredicted RBP17.1■□□□□ 0.33
DDX54-204ENST00000546898 VNN2O95498 520 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 DLATP10515 647 aaKnown RBP17.1■□□□□ 0.33
DDX54-204ENST00000546898 LAMP2P13473 410 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 PTPN2P17706 415 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 TNNI1P19237 187 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 NTHL1P78549 312 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 SNW1Q13573 536 aaKnown RBP17.1■□□□□ 0.33
DDX54-204ENST00000546898 WSCD1Q658N2 575 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 TRAPPC11Q7Z392 1133 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 BMP8AQ7Z5Y6 402 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 GUF1Q8N442 669 aaKnown RBP17.1■□□□□ 0.33
DDX54-204ENST00000546898 TOP6BLQ8N6T0 577 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 FAM84AQ96KN4 292 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms