RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SATB1Q01826 763 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 GRIN1Q05586 938 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 DMWDQ09019 674 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 STRN3Q13033 797 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 DUSP4Q13115 394 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 CYP4A22Q5TCH4 519 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 SPATA1Q5VX52 437 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 ARL6IP4Q66PJ3 421 aaKnown RBP13.66□□□□□ -0.22
COPS7A-221ENST00000546229 HAUS6Q7Z4H7 955 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 CHFRQ96EP1 664 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 PGLYRP2Q96PD5 576 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 PLIN2Q99541 437 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 OXCT2Q9BYC2 517 aaPredicted RBP13.66□□□□□ -0.22
COPS7A-221ENST00000546229 IL21Q9HBE4 155 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 CPSF3Q9UKF6 684 aaKnown RBP13.66□□□□□ -0.22
COPS7A-221ENST00000546229 TBX20Q9UMR3 447 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 KIAA1549LQ6ZVL6 1849 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 TPRP12270 2363 aaKnown RBP13.65□□□□□ -0.22
COPS7A-221ENST00000546229 CHD8Q9HCK8 2581 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 A0A1W2PRU2 124 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 OR6C75A6NL08 312 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 TISP43B9A030 160 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 PIRO00625 290 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 OGTO15294 1046 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 NCAM2O15394 837 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 SLC26A4O43511 780 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 SOAT2O75908 522 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 PRAMEF12O95522 483 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 NEFLP07196 543 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 NFICP08651 508 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 ATF6P18850 670 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 HOXC13P31276 330 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 SOX9P48436 509 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 LILRA4P59901 499 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 PPP2R3AQ06190 1150 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 MYBPC2Q14324 1141 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 IQCEQ6IPM2 695 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 ATAD1Q8NBU5 361 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 ATRIPQ8WXE1 791 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 FAM3CQ92520 227 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 PSMG2Q969U7 264 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 ZNF512Q96ME7 567 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-221ENST00000546229 HINFPQ9BQA5 517 aa13.65□□□□□ -0.22
COPS7A-221ENST00000546229 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-221ENST00000546229 EML5Q05BV3 1969 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 MYBPHLA2RUH7 354 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 CHADO15335 359 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 WEE1P30291 646 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 SMTNP53814 917 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 ATXN1P54253 815 aaKnown RBP13.64□□□□□ -0.23
COPS7A-221ENST00000546229 C9orf57Q5W0N0 161 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 OVOS1Q6IE37 1185 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 JADE1Q6IE81 842 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 Q6ZS52 159 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 ELMOD1Q8N336 334 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 RIN3Q8TB24 985 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 MSANTD3Q96H12 275 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 SENP8Q96LD8 212 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 IKZF4Q9H2S9 585 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 LMAN1LQ9HAT1 526 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 RBM12Q9NTZ6 932 aaKnown RBP13.64□□□□□ -0.23
COPS7A-221ENST00000546229 LARSQ9P2J5 1176 aaKnown RBP13.64□□□□□ -0.23
COPS7A-221ENST00000546229 NCDNQ9UBB6 729 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 HSFX1Q9UBD0 423 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 STYXL1Q9Y6J8 313 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 USP24Q9UPU5 2620 aa13.64□□□□□ -0.23
COPS7A-221ENST00000546229 TCHHQ07283 1943 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 ANKRD63C9JTQ0 380 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 H0YCG3 227 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 ZNF263O14978 683 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 HNRNPDLO14979 420 aaKnown RBP13.63□□□□□ -0.23
COPS7A-221ENST00000546229 PPP1R37O75864 691 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CCNE1P24864 410 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CTHP32929 405 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CCR3P51677 355 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 WNT7BP56706 349 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 GTF2BQ00403 316 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 PLD1Q13393 1074 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CCINQ13939 588 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CRELD2Q6UXH1 353 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-221ENST00000546229 TMEM150AQ86TG1 271 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 GPBP1Q86WP2 473 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 ARID3BQ8IVW6 561 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-221ENST00000546229 EFCAB13Q8IY85 973 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 AK8Q96MA6 479 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 GPR88Q9GZN0 384 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 ZCWPW1Q9H0M4 648 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 ST6GALNAC4Q9H4F1 302 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 OBP2AQ9NY56 170 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 SLC27A5Q9Y2P5 690 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CACNA1BQ00975 2339 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 CFAP47Q6ZTR5 3102 aa13.63□□□□□ -0.23
COPS7A-221ENST00000546229 MYO16Q9Y6X6 1858 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms